| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,097,158 | 0 | C | T | 34.2% | 29.3 / 29.8 | 38 | intergenic (+329/+407) | ycdU/serX | uncharacterized protein YcdU/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base C (9/16); new base T (6/7); total (15/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGG > NC_000913/1096860‑1097449 | tatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCCGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCACCCGGTGTGTGCAATaca > 1:387836/1‑300 (MQ=255) tgctccgTACTCTCTTGCGCACTTTGATTGTTGACTTAATAACCAGACAGGTGATGTGCACGACTTCCCCTCGCCCCAAAAGACGGGGTCGGGGACACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGaa < 2:75834/294‑1 (MQ=14) gTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCACTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTAATCCCCACGGTGTGTGCAATATACGaaa > 2:2371/1‑300 (MQ=255) gTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCAAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGaaaaaaaa > 1:32/1‑300 (MQ=255) cATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACTTGGTTGGGGGCACCCGTTGTGTGCAATATACGAAAAAAAAGCCCGTACTTCCGTACGAGCTCTTCTTTAAATACGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCg < 1:68027/300‑1 (MQ=255) tAACCAGACAGTTAATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTCCACGGTATGTCCAAATGGCTGTCGACAGTTGTCGAACCCAGGTCGGGGCTTATCGTCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAata > 1:315172/1‑300 (MQ=17) aggtgCNCGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTNCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTGTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg < 2:654147/298‑1 (MQ=255) aTGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGNGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGNCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg < 2:630855/300‑1 (MQ=255) gtgCACGATTTCCCCTCGCCCTAACAAACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggggg < 1:778060/300‑1 (MQ=255) gtgtataagagacagCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGTCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAtt < 2:618488/286‑1 (MQ=255) atgtCCCCTCTCCCTAACAGGCGTGGGCGGGGGCACCCGCTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTTAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGTTGTCGCCAGTTGTCGAACCCCGTTCGGGGTTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACt < 2:318090/297‑1 (MQ=11) tttCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAttcgaac < 1:2371/300‑6 (MQ=255) cGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGAGGTGAGGGGGGGATTGACtcgcttcgct < 1:105426/300‑1 (MQ=255) cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAttctgtctcttctccac > 1:632046/1‑285 (MQ=255) ggggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACCCGCTCCGCTCGCCCTGCGAGCAGCCCGCTCACTGTGTTCACGGTCTGTCCAACTGGCTGTCGCCCGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCAAAGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGAATCGCTTCGCTC‑GCCCTGTGGGCAGCCCGCt > 1:20252/1‑300 (MQ=11) gggCACCCGGGGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTTGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGTGCAGCCCGCTc < 1:519865/300‑1 (MQ=25) ccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACGTTCGTACGAGCTCTTCTTTAAATATAGCGGTGAGGGTGGGATTGACTCGCTTCGCGCGCCCTGCGGGCAGTCCGCTTACTGCGTTCACGGTCTGTCCAACTGGCTTTCGCCAGTTGTCTACCCCCGTTCGTGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCg < 1:222140/300‑1 (MQ=11) gtgtgtGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTc > 1:310337/1‑300 (MQ=34) tgCAATATACGAAAAAAAAGCCCGTACTTTTGTACGAGCTCTTCTTGAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt < 1:81740/300‑1 (MQ=21) aaagaaaaGCCCGTACTTTCGGATGAGCTCGGATTTAAAGATGACGGGGAGGGGGGGATTGACTTGCTTCGTTCGCCCTGCTGGCAGCTTGCTTGCGGCGTTCGCGGTCTGTCCAACGGGCTTCCGCCGGTTGTCGACCCCCATTCGGGGTTTCTTGTCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTg < 1:85511/296‑1 (MQ=11) tcttTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATCTGGCGGTGAGGGGGGGCTCGACTCGCTTCGCTC‑GCCCTGCGGGCAGCACGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTAGA‑CAGTTGTCGAACCC‑AGGTCgggg > 1:317458/1‑300 (MQ=255) atggaggggAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCTGACAGCCAACTCACTGCGGTCACGGCCTGTCCAACTGGCTGTCGCCAGTTTTCTACCCCCGTGCGTGGTTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATc < 1:520648/292‑1 (MQ=11) tGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCCgg < 1:803588/300‑1 (MQ=32) aGGGGTGGATCGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGGTCACGGTCTGTCTAACGGGCGTTCGCCAGTTGTCGACCCCCGTTCGGGGCGTCTCAGCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCCGgtg < 1:703657/300‑1 (MQ=11) aGGGGGAGATTGACTCGCTTCGCTCTCCCTGCGGTCAGCCCGCTCACTGCGTTCACGTTCTGTCCAACTTGCTTGCGCCATTCGTCCACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGTTCGGGGCTTCTCATCCCCCCGgtg < 2:428016/300‑1 (MQ=11) gCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCAACCGGTGTGTGCAATACACGAAAAAGAAGCCCGTACTTTCGTACGAGCTCTTCCTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTAGCTC‑GCCCTGCGGGAAGCACGTTCACTGCGTTCGCGNTCTGTCCAACAGGCTGCCGC‑CAGTTGTCGAACCC‑AGGTCGGGGCTTATCATCCACCCGGTGCGTGAAATATACGAAAAAAAAGTCTGTACTCTCGTACGCGATcttctt > 1:589774/1‑300 (MQ=11) gaacccaggacgtgggtgcgaagccccccGGTGTGTGCAATATACGAAAAAAAAGCTTGTACTTTCGTACGAGCTCTTCGTTAAATATGGCGGTTAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGTCCGCTCACTGCGTGCACGGTCTGTCCGACTGGCTGTCGC‑CAGTTTTCGAACCT‑CGTTCGGGGCTTCTTATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTGACtcgcttcgct < 1:664257/277‑1 (MQ=11) ggggCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg < 1:67758/300‑1 (MQ=255) tgtgttcgtggaaaccctgtgtggGCAATGTACGAAAAAAAAGCCTGTGTTTTCGGACGAGCCCTTCTTTAAAGATAGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGNGTGCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGTTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGc < 2:182168/282‑1 (MQ=11) ccgccccccGGTGTGTGCAATACACGAAAAAAAAGCTCGTACTTTCGGACGAGCTCTTCGTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCGC‑GCCCTGCGGGCAGCCCGTTCACTGCGTTCACGGTCTGTCCAACTGGCGGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCt < 1:729246/297‑1 (MQ=255) aTCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCTCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTc < 1:614407/300‑1 (MQ=25) tCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTGACTCGCTTCTCTCGCCCCGCGGGCAGCCCGCTCa > 1:737910/1‑300 (MQ=17) ctacccGGTGTGTGTAATATACGGAAAAAAAGCCTGTACTTTCGGACGAGCTCTTCTTTAAACGTGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCTGGCAGCCCACTCACTGCGTTCACGTTCTGTCCAACTGGCTGGCGC‑CAGTTGTCGAACCC‑CGGTCGGGGTTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTT‑AGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc < 2:120274/297‑1 (MQ=11) cccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTGACTCGCTTCGCTCGCCACGCGGGCAGCCCGCTccct > 1:811805/1‑297 (MQ=12) cccccGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTAACTCACCCCGCTC‑GCCCTACGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCCGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCAAGTGTGTGCAATATCCGAAAAAAAAGCCCGTACTTTCGTAAGAAATCTTATTTCAATGTGGCGGTG‑AGGGGGGGCTTGACTCTCCTAGCTCGCCCttctggcatcccactccat > 1:811749/1‑282 (MQ=11) ggTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACCCGCCCAACCC‑GCCCCACTAGCCGCCCGCTCCCTGCGTTCCCGATCCGCCCCACTGACTATAGCACA‑TTGCCGAACCC‑CTGCCGAAGCCCCCCACCCCCCAGATATATGCACTATACAAACAAAAAGCCCACACTTTCGTACGAGCTCTTCTTTAAATATGGAGGTGGAGGGGGGG‑TTGGCCCACTCCACTCGCCCTGCGGGCAGCCCTCTCCCCGCGtt > 2:497428/1‑300 (MQ=2) gtgtgtGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTTACCCACC‑CGATCCGCCCCACTAGCCACCCTCTCAATGCGTTCTCATTCTGTCCAATTTATTATATA‑CA‑TTTACAAACCCACGGGCAAGTATTCCCACCCCCAAGGTGTGTGCAATACATGAAAAAAAAGACCGTAATTTAGGAAGAGCGCTTATTTAAATATGGCGGTG‑AGGGGGGGGTTGACTCGATCCGCTCGCCCTGTGGGCAGCCCGCTCACTGCGTTc > 1:181377/1‑300 (MQ=2) gtgCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCAGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTATTTAAATATGGCGGTG‑CGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCACGCTCACTGCGTTCACgg > 1:313574/1‑300 (MQ=9) gtgCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATCCGAAAAAAAAGCCCGTACTTTCGTACGAGATCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTCACTCGCCCAACTCGCCATGCTGGCAACCCTCTCCCTGCGTTcccgt > 1:83802/1‑296 (MQ=11) | TATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTC‑GCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGC‑CAGTTGTCGAACCC‑CGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTG‑AGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGG > NC_000913/1096860‑1097449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |