| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,269,943 | 0 | G | T | 30.9% | 63.7 / 14.6 | 56 | intergenic (+341/+273) | yhaC/rnpB | uncharacterized protein YhaC/RNase P catalytic RNA component |
| Reads supporting (aligned to +/- strand): ref base G (16/22); new base T (16/1); total (33/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.74e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGT > NC_000913/3269652‑3270241 | cATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TAC‑TTCATCTCTCTTCC‑CCCCCa > 1:168872/1‑300 (MQ=255)cATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTAAGCTTATCAGGCCTACGCCATCTATGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCAGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATACGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCT‑TTCATTTTTTTGcc‑cccccc > 1:157296/1‑296 (MQ=39) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCGTCTATGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAAACCGCCGGAACGGTTTATTACGTACATCAGGTAGAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTAGTGGAAAG‑TCA‑TTCATCTTTCTGCC‑CCTCCac > 1:673593/1‑299 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGNGTGCTTTTGTAGGCAGGATAAGGCGTNCACGCCGCATCCGGCATGAATAAAGCGCACTCAAGAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTGTTTTGGGTATCGTGTCGTGGACAGCTC‑‑TTCATCTTTCTTcc‑cccccca > 2:469513/1‑295 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGGCAG‑TCA‑TTCATCTTTCTTcc‑cccccca > 1:670752/1‑295 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGGAAG‑GCA‑TTCACCTTTCTGCC‑CCCCCaa > 1:114953/1‑300 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCC‑TTCCTCCTTCTGcc‑cccccca > 1:624880/1‑295 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCCTCTTTCTTCC‑CCCCCaa > 1:469609/1‑300 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTTcc‑cccccca > 1:615455/1‑295 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTAAGTACATCAGGTAAAACTGACTGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGGCAG‑CCA‑TTCAGCTTTCTGcc‑catacaa > 2:254073/1‑294 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTAAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAAAG‑TCC‑TTCCTCTTTTTTCC‑CCCCCaa > 2:126237/1‑300 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTATGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑GCA‑GTGATCTTTCTGcc‑cacccca > 2:227114/1‑294 (MQ=255) aTCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTAAGCTTATCAGGCCTACGCCATCTATGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCNTGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACCG‑TCC‑TTCACCTTTCTGcc‑cccccca > 2:158025/1‑295 (MQ=255) ccTGTGCCCCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCCAAAGtcaa > 1:465061/1‑297 (MQ=255) gtgCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGCGGACAG‑TCC‑TTCATCTTTCTGCC‑CCTCCCAAAATCAAAAc > 1:180492/1‑300 (MQ=255) aGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGGAAA‑TCA‑TTCATTTTTCTTCC‑CCTCCAAAAGGCGAAACCCGCCGAAga > 1:674718/1‑299 (MQ=38) tCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGGCAG‑TTA‑TTCCTCTTTCTTCC‑CCCCCAAAAATAAAAACCCGCCGAAGT‑GGGgttttg > 1:320883/1‑299 (MQ=38) tttGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATANAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTg < 2:161736/300‑1 (MQ=255) gAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTATGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑CTCATCTTTCTGCC‑CCTCCCAAAACAAAAAACCGACGAAGA‑GGGGTTTTACGTAAACCAgggaaaa > 2:345733/1‑295 (MQ=38) gcgcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTTCC‑CCCCCCAAAACAAAAACCCGCCGAAGC‑GGGTTTTTCCGTACAACAAGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGtgta > 1:108004/1‑297 (MQ=37) gcgcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTCCATAAAACAGGTGAAACTGACCGATAAACCGCTTTCTTTTGGGtata > 1:71497/1‑300 (MQ=255) cgcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAg < 1:623540/300‑1 (MQ=255) gcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGTTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgt < 2:292487/300‑1 (MQ=255) tACGCTNATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGNAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAgtgt < 2:578295/300‑1 (MQ=255) aCGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGGCAG‑TCACTTC‑TCTTTCTCCA‑CCCCCAAAAACCAAACCCCAACGAAAC‑AAGTTTTTCCGTAAAAAAAGTGAACCTGACCGGTCAGCCGCTTTCTTTTggggcccgtgta > 1:225699/1‑291 (MQ=25) aCGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTTCC‑CCCCCCAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCTACAAGCCGCTTTCTTTTGGGTATAGTGTc > 1:225293/1‑300 (MQ=255) aCGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAA‑TTA‑TTCCTCTTTCTTCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTGCGTAAAACAGGTGAAACTGACCGATAAGCCAATTTCTTTTGGGGATAATGTc > 1:545908/1‑300 (MQ=37) ttATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTgg < 1:12906/300‑1 (MQ=255) tATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCCTCTTTCTTCC‑CCCCCCAAAATAAAAACCCACCGAAGA‑GGGTTTTTCCGTAAAACCGGTGAAACTGACCAACCAGCCGTTTTCttttttgtacagtttctttgt > 1:402010/1‑283 (MQ=37) aTCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAc < 1:144261/300‑1 (MQ=255) ggCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGGCAG‑TCA‑TTTATCTTTCTGTC‑CCTCCCAAAATAAAAAACCGCCGGAGC‑GGGGTTTTCCGTAAAACAGGTGGAACTGACCGATAAGACGCGTTTTTTTGGGTATAGTGTCGTgggaaagt > 1:467712/1‑294 (MQ=37) ggCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCC‑TTCCTCTTTCTTCC‑CCTCCCAAAGTCAAAACCCGCCGAAGC‑GGGTTTTTCCGTCAAACCGGTGGAAATGACCGATAAGCCGATTTCTTTTTGGTATAGTGTTGTGGGCAggt > 1:396245/1‑298 (MQ=37) ggCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCCTCTTTCTTCC‑CCCCCAAAAGCAAAAACCCACCGAAGC‑GGGTTTTTCCATCAACCAAGTGAAACCGACCAACAAGCCGAGTTTTTTTggggacagtctttcatttcggc > 1:152717/1‑281 (MQ=25) ggCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCCTCTTTCTGCC‑CCCCCAAAAATAAAAAACCGCCGAAGC‑GGGTTTTTCCGTACAACAGGCGAAACGGACCGATAAGGCGCTTTCTTTTggttgcagtttcttgggccgtt > 2:310458/1‑280 (MQ=25) ggCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTTCC‑CCCCCCAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTCCGTAAACCAGGTGAAACTGACCGATAAGCCGGGTTCTTTTgtggacagtcccttagctcggc > 1:707543/1‑279 (MQ=25) ggCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGAAACGGTTTATTNCGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAAAG‑TNA‑CTCATCCTTCTGCC‑CCCCCAAAAATAAAAAACAGCCGAAGAAGGGTTTTCA‑ATCAACCAAGTGGAACTGACCGATAAACCAATTTCTTTTgtgggcctttctttttttcggc > 2:555642/1‑279 (MQ=25) gCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCCTCTTTCTTCC‑CCCCCAAAAGTAAAAAGCCGCCGAAGC‑GGGGTTTTCCGTAAACCCAGTGAAAATGAACGAGAAGCCGGtttttttttggggcagtgttgtgtctaggac > 2:604198/1‑277 (MQ=25) tACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGNACGGTTTATTACGTACATCAGGTAAAACTGACAGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGtcattc < 1:501598/300‑1 (MQ=255) cATCTCTGCAGTATATTGAATTTGCGTGCTTTTGTAGGCAAGATAAGGCGTTCACGCCGCAGCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGGTTATTACGTACAGCAGGTAAAACTGGCCGATAAGTCGCTTTCTTTGTGGTATAGTGTCGTGGACAG‑TTA‑TTCATCTCGCGGAC‑CCTCCAAAATTAAAAACCCGCCGAAGC‑GGGTTGTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCtt < 2:216736/300‑1 (MQ=21) ctctGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAAAG‑TCA‑TTCATCTTTCTGCCACCCCCCAAA‑TAAAAACCCACCGAAGC‑GGGTTTTTCCTTAAAACCGGTGGAACTGACCGATGAGCCGTGTTCTTTTGGGGATAgtgttttgtggtgggcctgtttctttt > 1:417336/1‑277 (MQ=25) ctGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGc < 1:337036/300‑1 (MQ=255) gCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAc < 2:282298/300‑1 (MQ=255) cATCCTGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTACTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAAc < 2:185792/300‑1 (MQ=255) ggCATGAATAAAGCACACTCAATAATCTGAAACCCGCCGAAACGGTTTATTACTTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCACCTCTCTGCC‑CCTCCAAAAGTAAAAACTCGCCGGAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCTAAGCGGGTTTTTACGTAAACCAGGTGAAACTGAcc < 2:29796/300‑1 (MQ=17) tggaaCCCGCCGGAACGGTGTGTGACGGGCATCAGTGAAAACTGAACGATAAGCCGCTGTCTGTTGGGTGTAGTTTCGTGGACGG‑TCG‑TGCATCTGTATTCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGGGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGc < 2:409280/297‑1 (MQ=14) tGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTGGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGc < 1:92364/300‑1 (MQ=255) aaaacttattgagcgggttattgCGTACAGCAGTTAAAAATGACCGAGAAGCCGTTTTCGTTTGGGTATGTTGTCGTGGAAAC‑TTG‑TTCAGATGTAGGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGcgt < 2:606614/283‑1 (MQ=14) aaaCCCGCCGGAACGGGTTATGACGTATATCAGGTAAAACTGACCGATAAGCCGCGTTCGTTGGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCGCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTNTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCATGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGcgt < 2:168053/300‑1 (MQ=17) ccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTTATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAc < 2:292318/300‑1 (MQ=255) ccgGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTGTTGGGTATAGTTTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAc < 1:99460/300‑1 (MQ=255) ccgGAACGGTTTATTACGTACATCAGGGAAAACTGACCGATAAGCCGCTTTCTTTGGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTNAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAc < 2:169737/300‑1 (MQ=255) ccgGAACGGGTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAc < 1:446428/300‑1 (MQ=255) gAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGt < 1:666269/300‑1 (MQ=255) aCATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTGGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑Gcc < 1:321686/300‑1 (MQ=255) g‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAATCATTCACCTTTCTTCCCCTCCAAAAGCCAAAACCCGCCGAAGCGGGTTTTTCCGTCAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAATCATTTCCCTTTCTTCCCCCCCCAAAAACAAAA‑CCCACCGAAGAGGGgtttttcttcaacccagtggaaccta > 1:469796/1‑279 (MQ=14) tGCC‑CCTCCAAAAGTAAAAACCCGCCTAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGt < 2:461166/300‑1 (MQ=255) | CATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAG‑TCA‑TTCATCTTTCTGCC‑CCTCCAAAAGTAAAAACCCGCCGAAGC‑GGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGT > NC_000913/3269652‑3270241 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |