| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,269,981 | 0 | A | C | 37.9% | 80.7 / 10.1 | 60 | intergenic (+379/+235) | yhaC/rnpB | uncharacterized protein YhaC/RNase P catalytic RNA component |
| Reads supporting (aligned to +/- strand): ref base A (3/33); new base C (22/0); total (27/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.09e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCC > NC_000913/3269690‑3270270 | gcgGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAAc < 1:477449/300‑1 (MQ=255) ggTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCNGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGNTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCC‑TTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTCCATA‑CAACAgg > 2:505195/1‑300 (MQ=255) gTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AATCAGGt > 1:196917/1‑300 (MQ=255) aaaCTGATGGCAACCGCAAAAATGCCTGATGCGCTACACTTATCATACCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTNCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTAGTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCGGCCCCTCCAAAAGGAAAAACCCGCCGAAGCGGGTTTGTACGTA‑AAACAGTT‑GAAA‑c < 2:564558/300‑1 (MQ=38) cTGATGGCAACCGCAAAAATGCATGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGNTAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑CTCCTCTTTCTGCCCCCCCCAAAACAAAAACCCACCGAAACAGGCTTTTCCGCA‑AAACAgatgggacaga > 1:441348/1‑290 (MQ=37) gATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTATGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCCCGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGATTTCTTTTGGGTATAGTGTCGTGGAAAATTA‑CTCACCTTTCTGCCCCCCCAAAAATCAAAACCCGCCGAAACGGGTTTTTCCGTA‑CAACAGGT‑ggaaacgacc > 1:323157/1‑291 (MQ=37) aCCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATNTATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGc < 2:471646/300‑1 (MQ=255) aCCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGTT‑GAAA‑C‑TGACCGATAAGc < 2:332814/300‑1 (MQ=255) cgcccgaggcgcGACGCTGATCAGGCCTGCGCCGGCTCGGCAATATAGGGAATGGGCGTGAGTTTGTATGCAGGGTGAGGCGTTTACGCTGAAGGTGGTATGGATAAAGCGCACTCAACAATCGGAAACCCGCCGAAACGGTTTGTTANGTAAATCAGGTAAAACTGACCGATAANCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AATCAGGT‑GAAA‑C‑TGACCGATAAGCCgggttctgt < 2:425949/292‑9 (MQ=2) gATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCNCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGt < 2:558577/300‑1 (MQ=255) tGCGCTACGCTTATCAGGCCGACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AATCAGGT‑GAAA‑C‑TGACCGATAAGCCgggttctgtcgtggac < 1:26641/300‑16 (MQ=255) gcgcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACCATCA‑CTCCCCTTTCTTCCCCCCCCAAAATAAAAAACCGCCAAAGAGGGGTTTTCCATC‑AAACAAGT‑GAAA‑C‑ttaacacccaaccaatttttttttgggcta > 2:483259/1‑271 (MQ=25) gcgcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTTA‑TTCACCTTTCTGCCCCCCCAAAAATAAAAAACCGCCAAAACGGGTTTTTCAGTC‑AAACAGGT‑GAAA‑C‑TGACCGATCAGACGTTTTTTTTTgggggga > 1:340794/1‑296 (MQ=37) gcgcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCC‑TTCCCCTTTCTTCCCCCCCCAAAATCAAAACCCCCCCAAACGNGTTTTTCCTTA‑CACCCGGT‑GAAA‑C‑TGACCGATAAACCGATTTTTTTTngggatt > 2:513812/1‑296 (MQ=25) gcgcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCACTTC‑TCTTTCTGCCCCCCCAAAAGCAAAAAACCGCCGAAAAGGGGTTTTCCGTA‑AAACAAGT‑GAAA‑C‑TGACCTATAAGCCAATTTCTTTTgtggaca > 2:368058/1‑294 (MQ=37) gcgcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTTCCCCCCCAAAAATAAAAACCCGCCGAAGCGGGGTTTTCCATA‑AAACAGGT‑GAAA‑C‑TGACCGATGAGCCGCTTTTTTTTGGGtata > 1:588238/1‑300 (MQ=37) cgcTACGTTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGTT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAg < 2:285716/300‑1 (MQ=255) cgcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAg < 2:108708/300‑1 (MQ=255) gcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAgt < 1:134824/300‑1 (MQ=255) tACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAgtgt < 1:221252/300‑1 (MQ=255) tACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AACCAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAgcgt < 1:254599/300‑4 (MQ=255) aCGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCCTCTTTCTGCCCCTCCAAAAGTAAAAACCCACCGAAGCGGGTTTNTCCATA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGATTTCTTTTGGGTANAGTGTc > 2:512853/1‑300 (MQ=255) aCGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCA‑TTCATCTTTCTGCCCATCCCAAAATCAAAACCCGAAGAAGCAGGGTTTTCCGTA‑AAACCGGT‑GGAA‑C‑TGACCGATAAGCCgtgtttttttgtggatagtgcc > 2:364191/1‑279 (MQ=37) ataagagacagaCGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTgg < 1:392242/289‑1 (MQ=255) tATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCC‑TTCATCTTTCTGCCCCCCCCAAAATAAAAACCCACCGAAGCGGGTTTTTCCGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCTTGG‑a > 1:380832/1‑300 (MQ=255) tATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAATCA‑TTCACCCTTCTGCCCCTCCAAAAATAAAAACCCACCGAAAAGGGGTTTTCCGTC‑AAAAAGGT‑GAAA‑C‑TGAACGACAAGCCACTTTTTTTTGGGTATAATGTCGttgg > 1:214737/1‑297 (MQ=37) atcattccTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑c < 2:604807/294‑1 (MQ=255) ggCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCC‑TTCATATTTCTGTACCTCCAAAAGGAAAAACCCGCCGAAGCGGGTTTTTGCGTA‑CAACAGGT‑GAAA‑C‑TGGACTATACGCCGCGTTCTTTTGGGTGTAGCGTTGTGG‑aaaggc > 2:123254/1‑295 (MQ=25) ggCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCCTCTTTCTTCCCCCCCCAAAGTAAAAACCCGCCGAAGCGGGTTTTTCCATA‑AAACCGGT‑GGAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑AA‑Gtc > 1:374513/1‑300 (MQ=37) ggCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGGCA‑CTCACCTTCCCGCCCCCCCAAAAATCAAAAACCAACGAAGCAGGTTTTTCCGCC‑CAACAAAT‑GAAA‑CCTGAC‑AATAAGCCGGTTTCTTTTGGGtataacgcggtgggacaat > 1:540545/1‑285 (MQ=255) aCGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAATCC‑CTCCCCCTTCTTCCCCCCCAAAAATAAAAAACCACCAAAACAGGTTTTTCCATC‑AAACAAGT‑GAAA‑C‑TGAACGATAAGCCACTTTTTTTTTGGTGTAGTGTCGTgggttgctcttct > 2:385090/1‑289 (MQ=255) cGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCCCCCAAAATAAAAACCCACCGAAGTGGGTTTTTCCGTC‑AAACAAGT‑GAAA‑C‑CGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑AACA‑Gtcctccc > 1:1556/1‑295 (MQ=25) ccATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCt < 1:235331/300‑1 (MQ=255) ctctGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCCTCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCAAAGCGGGTTTTTCCGTA‑AACCAAGT‑GAAA‑C‑TGACCGATAAGCCGGGTTCTTTTTGGTACAgttttttgtctcagccctcccctcttt > 1:242714/1‑275 (MQ=25) ctctGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAAGCA‑TTCATCCTTCTTCCCCCCCAAAAATCAAAACCCACCAAAGCGGGTTTTTCCGTC‑AAACCGGT‑GAAA‑C‑CGACCGATCAGTCACCTTCTTTTGGGGCTAGTGTCGTgggaaaaccctcaccctttc > 1:533249/1‑282 (MQ=25) ctGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCANAAGCAAAAACCCGCCGAAGCGGGTTTTTCCATC‑AACCCGGT‑GAAA‑C‑TGAACGATAAGACGGGTTCTTTTGGGTATAgtaccgtgtctaagcccccccgctcctac > 2:552994/1‑273 (MQ=21) ctGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑Gc < 1:371190/300‑1 (MQ=255) ctGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCCCCCAAAATAAAAACCCGCCAAAGCGGGTTTTTCCGTA‑AAACAGGT‑GAAA‑C‑TTACCGATAAGCCGCTTTCTTTTGGGGATAGTGTCTTgggaaagccctcacccttcctc > 1:509432/1‑280 (MQ=25) ctGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCCTCCCCCCCAAAAATAAAAACCCACCGAAGCGGGGTTTTCCGTC‑AAAAAAGT‑GAAA‑C‑TTACCAACAAGCCGTTTTCTTTTTGGTATAATGTCGTgggcaaaccctcactctccttc > 1:122284/1‑280 (MQ=25) cTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAACGTCC‑TTCCCCCTTCCTCCCCTCCAAAAACAAAAAACCGCCGAAGAGGGTTTTTTCGTCCAACCAGG‑‑GAAA‑C‑CGCACGAAAAGCCCCTTTCTTTTTGGTATAGCTTCGTGGGA‑AA‑GCCATTC‑TCTTTTTTCCCCCTCCaaaaacaaaaacaaca > 2:204651/1‑296 (MQ=16) gggtAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAATCA‑TTCCTCTTTCCGCCCCTCCAAAAATAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATCAGCCGCTTTCTTTTTGGTCTCGTTTCGTGG‑A‑CAAGTCGTCCACCTTTCT‑‑CCCCTCCCAAAACAAAAACCCACCGaaagggggttt > 1:308949/4‑291 (MQ=18) ttCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAAcc < 2:184646/300‑1 (MQ=255) gAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGAAAATCA‑TTCCTCTTTCTTCCCCCCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTCCGTA‑AAACAAGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTGTAGTGTCGTGG‑G‑CA‑AGCACTCATCTTTCT‑GCCCCCCCAAAAACAAAAAACCACCAAAGAGGGGTTTTCCGTGAAACAAGGGGAAA‑TGACCgccga > 1:320850/1‑296 (MQ=17) gaagcggAAACCCGACGGAACGGTTTATGACGTGCAGCAGGTGAAACTGGTCGAGAGGTTGCGTTCGGTGTGGTATAGTTGCGTGGACAGTCA‑TGCAGCTCTAGACCCCTCCAAAAGTAAAAACCCGCCTAAGCGGGTTGTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGt < 2:334227/294‑1 (MQ=14) aaaCCCTCCGAAACGGTTTATGACGTACATAAGGGAAAACTGACCGATAAGCCGTTTTCGTTTGGGGATAGTGTCGTGGACAGTCA‑TTCATCTTTCGGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTGACGTA‑AAACAGTG‑NAAA‑C‑TGACCGAGAAGCCGCTTTCTTTNGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGcgt < 2:409591/300‑1 (MQ=17) aaaCCCGCCTGAACGGGTTATTACGTGCACAAGGGAAAACTGACCGATAAGCCGTTTTCGTGTGGGTATAGTGTCGTGGACAGTTA‑TTTATCTTTCGGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑NAAA‑C‑TGACCGATAAGCCGCTTTCTTTNGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGcgt < 2:426831/300‑1 (MQ=17) tggcgggTAAGACTGACCGATACGCCGTTTGCTGTTGGGTATAGTGTCGTGGACAGTCA‑TGCATCTTGCGGCCCCTCCAAAAGTAAAAACCCGCCTAAGCGGGTTTTTACGTA‑AAACAGGG‑GAAA‑C‑TGACCGATAAGCCGCTTTCGTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑Gccc < 2:399459/295‑1 (MQ=17) gtCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑AA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAACAAAAACCCACCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCCGTCCCCTTTCTTCCCCCCCCAAAACCAAAAACCCACCAAAGGGGGtttttcataaaatac > 1:24778/1‑290 (MQ=17) ccgaaaaatcctgcgAAGCGGGTCTTTACGTA‑AAAC‑GGTAGGAA‑A‑TGACCGAGATGCCGTTTGCGTTTTGTTGTAGTGGCGTGG‑A‑CA‑TTTATTCAGCTTGCG‑GCCNCGCCAAAAGCAAAAACCTGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGTCGCTTTCGTTTGGGTATAGTGTCGTGGACAGTTATTCAGCTTTCT‑TCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTGTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 2:556546/287‑1 (MQ=9) agtaaaaatctgcttaggcgtgttattACGTA‑AAACAA‑T‑GAAAAC‑TGACCGAGAAGCCGCTTTCGTTTGGGTATATTTGCGGGG‑A‑CA‑GTCATTCAGCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGTTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 2:490988/275‑1 (MQ=14) aGTAAAAATCCGACGGAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTGCTTTGGAGTATAGTGTCGTGG‑A‑CA‑TTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 2:34238/300‑1 (MQ=255) aGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 1:37088/300‑1 (MQ=255) aGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCGCCAAAAGCAAAAGCCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 1:37979/300‑1 (MQ=255) aGTAAAAACCCGCCGAAGCGGGTTTTGACGTA‑AAACGGGT‑GAAA‑C‑TGACCGATAAGCCGCTTGCTTTGGGGGATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCG‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc < 2:619948/300‑1 (MQ=255) aaaCCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtca < 1:539235/300‑1 (MQ=255) cgccgAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTNTAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGANAAGCCGGGTTCTGTCGTGGACAGtcattcat < 2:451854/300‑1 (MQ=255) ccgAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt < 1:515494/300‑1 (MQ=255) agcaggTTTTTACGTA‑AACCATGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAACGGGTTTTTACGT‑AAACCAGTTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGc < 2:291419/296‑1 (MQ=255) aGCGGGTTTTTACGGA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTGTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGc < 1:131627/300‑1 (MQ=255) gCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGcc < 1:524147/300‑1 (MQ=255) | GCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCA‑TTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTA‑AAACAGGT‑GAAA‑C‑TGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGG‑A‑CA‑GTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGT‑AAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCT‑GCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCC > NC_000913/3269690‑3270270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |