| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,703,531 | G→T | Y106* (TAC→TAA) | dppD ← | dipeptide ABC transporter ATP binding subunit DppD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,703,531 | 0 | G | T | 96.7% | 195.1 / ‑1.8 | 61 | coding (318/984 nt) | dppD | dipeptide ABC transporter ATP binding subunit DppD |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (23/35); minor base . (2/0); total (26/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTGTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCACCCACAATCCCGACCACTTCGCCCTGTTTTACGCTGTAGCTG > NC_000913/3703285‑3703771 | aaTGGTCCCGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGc < 2:396635/251‑1 (MQ=255) aTGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAAGCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCa < 2:468603/251‑1 (MQ=255) ggtggtCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCCCGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGATAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGGTAAGGC‑TGGTCa < 2:281562/251‑1 (MQ=255) tCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTTTTGCCGGCCTGATG‑CACCTTAAACGCTTTCCTTATTTGG‑AAACCCCCGGGTTATCACGGGGTTAGGC‑TGGTCATCggg > 1:27339/1‑251 (MQ=255) cGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGAGCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAg < 2:345762/251‑1 (MQ=255) ggcgaTCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGa < 1:57529/247‑1 (MQ=255) gcagTTGTGGCCGACAGGCAATCGCCAGGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTGGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACTCACGGTTTAGCACGGGTTAAGGC‑GGGTCATCTGGTCCTGGAATAGCATCGcc < 2:270772/251‑1 (MQ=255) gCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAg < 1:179089/251‑1 (MQ=255) cAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAgg < 2:412654/251‑1 (MQ=255) gCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTgcg < 2:423675/251‑1 (MQ=255) gCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTGTTGCCGCCCCGATG‑CAACTTAATCGCTTCCATAATCTTG‑AAAACCCCCGTTTTGCACCGGTTAAGGC‑TGGGCATCGGGGCCTGGTAGATCATCGCCAC‑CTCGGcacccccccgggtggg > 2:353583/1‑240 (MQ=255) cATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATTCCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTgcggc < 1:131199/251‑1 (MQ=255) tGGCGATCATCACGCGCTGGCTCATGCCGACGGAAAGCTGGTGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTGTTGTCGCCCTGATG‑CACCTTAATCGCTTCCCTAATCTGG‑AAACCCACGGTTTTGCACCGGGTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAA‑TTCGGCACCCCCCAGGTTGCGgcgc > 1:161666/1‑251 (MQ=255) gATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTTTTTCCGCCCCGATG‑CACCTTAATCGCTTCCCTTATCTGG‑GAACCCACGGTTTAGCACGGGTTAAAGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCCCCAGGTTGCGGCGCTCtt > 1:253274/1‑251 (MQ=255) gATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATACAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTTTTGCCCCCCCGCTG‑TACCTTTATCCCTTTCATCATCTGGCAACCCCCCGGT‑TAGCACGGGTTAAGGCCTGG‑CCTCGGGTCCTGGGACATCCTCGCCCC‑TTCCGAACCCCCCCGGTTGCGGCGCTCtt > 2:292175/1‑251 (MQ=255) tcatcaCGCGCTGGCTCATGCCGCCGGACAGCTGATGCGGGTAAACATCCAGCCGCGATGCCGGATCGGGAATACCAACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTGTTGCCGACCTGCTC‑CACCTTAATAGCTTCTATAATCTGGGAAAACACCGGT‑TAGAACCGGGTAAGGC‑TGGTCCTCCGGTCCCGGGAAAACATCGCCCC‑CTCGGCACCCCCCAGGGTGAGgcgcgatttt > 2:232327/1‑245 (MQ=255) aCGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTga < 1:467701/251‑1 (MQ=255) cgcgCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGAACCCACCAGGTTGCGGCGCTCTTTCTCTgag < 2:71601/251‑1 (MQ=255) cgcTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGAt < 1:347609/251‑1 (MQ=255) cgcTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTTTTTGCGCCCCGATGTCCCCTTATTC‑CTTCCCTAATCTGG‑GAACCCACGGGTTATCACGGGTTTATGC‑TGGGCCTCCGGGCCTGGAAGATCATCGCCAC‑TTCCGCACCCCCCAgggttcggggccttttttttgaggt > 2:93639/1‑228 (MQ=255) gcTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTACCTTTTGT‑GCCGCCCTTCTG‑CACCCTAATCGCTTTCATAATCTGG‑TAACCCACCGCTTTTCACGGGTTACAGC‑TGGTCATCCGGGCCTGGCAGATCATCCCCCC‑TTCATCACCCCCCCCGTTGGGGGGCTCCTTTTCTGGGAt > 2:83021/1‑250 (MQ=255) gccgccGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAAt < 2:36101/251‑1 (MQ=255) gccgccGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTGTTGCCGCCCTGCTG‑CCCCTTTATCGCTTCCCTAATCTGG‑AAACCCCCGGCTTTGCACGGGGTTAGGC‑TGGGCCTCGGGGCCTGGGAGATCACCGCCACCTTCG‑CACCCACCACGGTGGGGGGCCCTTTTTTTGAGATACGccgccaa > 2:357788/1‑244 (MQ=255) cgGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGGTGCGGCGCTCTTTTTCTTAGATACGCTGCAAATCCTgg > 1:244831/1‑251 (MQ=255) aaGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGt < 2:436755/251‑1 (MQ=255) aGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTTTTTCCCCCCTGTTG‑CACCTTAATCGCTTCCCAAATCTGG‑GAACCCCCGGTTTTTGACGGGTTAAGGC‑TGGGCCTCGGGGCCCCGAAGAACATCGCCCC‑CTTGGCCCCCCCCAGGGTTCGGCGCCCTTTTTCTTAGACACCCTTCAAATCCTGTCCggt > 2:372155/1‑249 (MQ=255) aGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTTTTGCCGCCCTGATG‑CACCTTAATCGCTTCCCTAATCTTG‑GAACCCACGGGTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCCGCACCCACCAGGGTGCGGCGCTCTTTTTCTTAGAAACGCCGCAAATCCTGGCCGtt > 2:205793/1‑251 (MQ=255) gTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGtt < 2:202449/251‑1 (MQ=255) gTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGGTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGtt > 1:350654/1‑251 (MQ=255) aaCATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCGTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGttttt < 1:286313/251‑1 (MQ=255) aTCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTTTTGCCGCCCTGATG‑CACCTTTATCGCTTCCATAATCTGG‑AAAACCACGGTTTTGCACGGGGTAAGGC‑TGGGCATCGGGTCCTGGAAGAACATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCCGCAAATCCTGGCCGGTAAACTCCAGtttttttg > 1:217520/1‑248 (MQ=255) cgcgATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTAc < 2:372391/251‑1 (MQ=255) aTGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCgg < 1:172347/251‑1 (MQ=255) gCCGGATCGGGAATACCGACCTGATTCAGCAGTTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTGTTTCTGCCATTACGCGGc < 2:310144/250‑1 (MQ=255) gCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGcc < 1:353583/251‑1 (MQ=255) gCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGcc < 2:311223/251‑1 (MQ=255) cGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCg < 1:113909/251‑1 (MQ=255) ggATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCgg < 2:357774/251‑1 (MQ=255) aTCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGAt < 1:413649/251‑1 (MQ=255) gggAATACCGACCTGATTCAGCAGGGCAATCGCTCGCTGACGGCGGGTAA‑TTTTTGTGCCGCCCTTATT‑CACCTTTATCGCCTCCCTAATCTGG‑AAACCCCCGGGTTAGCACGGGGTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCCC‑TTCGGCACCCCCCAGGTTTGGGGGCCCTTTTTTTGAGAATCGCTGCAAATCCCGGCCCGTAAACTCCCGGTTTTCTTCCATTACGCGGCCCGGGTaa > 2:317537/1‑250 (MQ=255) aaTACCGACCTTATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAG‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTTCAAATCCTTTCCGTTGAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATaatcaa < 1:46247/251‑1 (MQ=255) aCCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATaatcaatc < 1:35977/250‑1 (MQ=255) gATTCAGCAGGTAAATCGCTCGCTGACGGCGGTTAC‑TTTTGTTGCCGCCCTGATG‑CCCCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCCCGGGTTAAGGC‑TGGTCATCGGGTCCTGTAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCAt < 2:358543/250‑1 (MQ=255) cagGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCg < 2:185019/136‑1 (MQ=255) cagGTCAATCGCTCGCTGACGGCGGGGAC‑TTTTTTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGGCATCGGGTCCTGGGAGATCATCGCCAC‑TTCg > 1:185019/1‑136 (MQ=255) cAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCCGATT‑CACCTTAATCGCTTCCATAATCTGG‑AAAACCACGGTTTAGAACGGGGTTAGGC‑TGGGCATCGGGTCCTGGGAGAGCCTCGCCAC‑TTCGGCACCCACCAGGGTGCGGCGCTCCTTTTCTGCGATACGCTGCAAATCCCGGCCGGTCAACTCCCGTTTTTTTGCCATTACGCGGCCCGGATAAACCAACACCCCCCTAATCGcccggaa > 2:465081/1‑245 (MQ=255) tGACGGCGGGTAC‑TTTTTTTGCCGCCCTGATG‑CCCCTTTATCGCTTCCCTAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGGCATCGGGGCCTGGAAGATCATCGCCCC‑TTCTGCACCCACCAGGGTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGGTTTTTTGCCATTACGCGGCCCGGGTAATCAATCAACCCCCTAATCGCCCGTTGACTGACCGACtt > 2:308909/1‑251 (MQ=255) gACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACt < 1:233550/249‑1 (MQ=255) gggTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAGACTCCAGTTTTTCTGCCATTACGCGGCCCGGATCATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCgg > 2:13150/1‑249 (MQ=255) ggTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGc < 1:18485/251‑1 (MQ=255) aC‑TTTTGTTGCCGCCATGATG‑CACCTAAATCGCTTC‑ATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCgg < 2:122097/250‑1 (MQ=255) gttgCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCa < 1:357788/250‑1 (MQ=255) gccgccCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCAcccc > 2:235009/1‑250 (MQ=255) ttactctcTTCCCTAATCTGG‑AAAGCCACGGAAAAGAACGGGTTAAGGC‑TGGTCATCGGGAAGAGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGGGCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTAAAAGGAGCCGGACTCACCCACAATCCCGACCACTTc > 1:161187/8‑251 (MQ=255) cGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCACCCACAATCCCGACCACTTCGCCCt > 1:365796/1‑251 (MQ=255) cGCTTCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCACCCACAATCCCGACCACTTCGCCCt > 1:385203/1‑251 (MQ=255) tttCCAAAATCTGG‑AAACCCACGGTTTAGCACGGGGTAGGGC‑TGGTCCTCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTGTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATAAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCACCCACAATCCCGACCACTTCGCCCTGt > 2:188343/2‑251 (MQ=255) tCCATAATCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCACCCACAATCCCGACCACTTCGCCCTGt < 2:365796/249‑1 (MQ=255) aaTCTGG‑AAACCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCACCCACAATCCCGACCACTTCGCCCTGTTTTACGc < 1:14411/251‑1 (MQ=255) aaaCCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCACCCACAATCCCGACCACTTCGCCCTGTTTTACGCTGTAGCt > 1:31262/1‑251 (MQ=255) aCCCACGGTTTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCATCCACATAATCGCCAGCGAACTGACCGACTTACCGGAGCCGGACTCACCCACAACACCGACCACTTCTCCCTGTTTTACGCTGTAGCTg > 2:255246/1‑250 (MQ=255) | AATGGTCACGTCCAGCGCGGTGGTCGGTTCATCGGCAATCAGCAGTTTTGGCCGACAGGCAATCGCCATGGCGATCATCACGCGCTGGCTCATGCCGCCGGAAAGCTGATGCGGGTAAACATCCAGACGCGATGCCGGATCGGGAATACCGACCTGATTCAGCAGGTCAATCGCTCGCTGACGGCGGGTAC‑TTTTGTTGCCGCCCTGATG‑CACCTTAATCGCTTCCATAATCTGG‑AAACCCACGGTGTAGCACGGGTTAAGGC‑TGGTCATCGGGTCCTGGAAGATCATCGCCAC‑TTCGGCACCCACCAGGTTGCGGCGCTCTTTTTCTGAGATACGCTGCAAATCCTGGCCGTTAAACTCCAGTTTTTCTGCCATTACGCGGCCCGGATAATCAATCAGCCCCATAATCGCCAGTGAACTGACCGACTTACCGGAGCCGGACTCACCCACAATCCCGACCACTTCGCCCTGTTTTACGCTGTAGCTG > NC_000913/3703285‑3703771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |