| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,549,037 | T→C | V77A (GTC→GCC) | fimH → | type 1 fimbriae D‑mannose specific adhesin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,549,037 | 0 | T | C | 95.2% | 131.3 / ‑4.9 | 43 | V77A (GTC→GCC) | fimH | type 1 fimbriae D‑mannose specific adhesin |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (21/19); minor base G (2/0); total (24/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
ATTGTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAAC > NC_000913/4548802‑4549278 | atTGTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCCATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCACAACATGGTCGTGGGTCTTTTGACGCAAAACTTTTTCCATAACGATTATCCGGAAACCATTTAAAACAATGGCAC‑ACCGCAACGAgg > 1:270496/1‑251 (MQ=255) tGTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCCGCCCCAATGTTTATGTAAACCTTGCGCCCGTCGGGGATGTGGGGCAAAACCTGGGCGTGGATCTTTCTTCCCCAACATTTTGTCATTACGATTATTCGGAAACCCTTTCAGACTATGCCACTAC‑GCAACGAGGcc > 2:13136/1‑250 (MQ=255) gTAATGAAACGTGTTATGCCCCTGTTTGCTGTCCTGTTGATGGTTTGGTCGATAAATGCCTGTTAATTCGCCTGAAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTc < 2:123546/251‑1 (MQ=255) gTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAAACTTGGGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGGTCTTTTGACGCAAATCTTTTTCCCTAAAGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTc > 1:112262/1‑251 (MQ=255) gAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGGAACGCCAATGTTTATGTAAACCCTGCGCCCCTCGTGAATGTGGGGCAAAACCCGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGCAAACATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCtt > 1:144856/1‑251 (MQ=255) aCGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCCGCGCCAATGTTTATTTAAAACTTGCGCCCGTCGTGAATGTGGGGCAAAAACTGGTCGTTGATCTTTTGACGCAAATCTTTTGCCCTAACGATTTTCCGGAAAACCTTTCAGACTATTCCAC‑CCTGCAACGAGGCCCGGCTTAtt > 1:377278/1‑250 (MQ=255) cGAGTTATTACCCTTTTTGCTGTACTGCTGAGGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAACCCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATTCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATgg < 1:379794/251‑1 (MQ=255) tattaCCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCCGCGCCAAAGTTTATGTAAACCTTTCGCCCGTCGTGAATGTTGGGCCAAACCTGGGCGTGGATCTTTCGACCCAAATCTTTTTCCCTAAAGATTATCCGGAAACCATTTCAGACTATGCCCC‑CATTCAACAAGGCTCGGCCTATGgcggcg > 1:100580/1‑251 (MQ=255) taCCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCCATGTTTTTGTAAACCCTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAAATTTTTTCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCCACGAGGCTCGGCTTTTggtggggggg > 1:87598/1‑243 (MQ=255) ggcggTACTGCTGAGGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAAtt < 1:42725/247‑1 (MQ=255) aCTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCCATGTTTATGTAAACCTTGCCCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGGTCTTTCTACGCCAATCTTTTTTCATAACGATTTTCCGGAAAACATTACAGACTATTGCAC‑ACTCCAACGAGGCCCGGCTTATGGCGGCGGG‑tttttttattttttcc > 2:118358/1‑237 (MQ=255) tGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGGGGCCGCGCCAAAGTTTTTGTAAACCCTTCGCCCCTCGTGAATGTGGGGGAAAAACCGGTCGGGGGTGTTTTGACGCAAAAATTTTGCCATAACGCGTATCCGGAAAACATTACCAACCATGCCAC‑ACCGCAAACAGGCCCGGCTCTTGGCGGCGGGGTTTTTTAATTTTTCCgggccgcg > 2:170278/1‑246 (MQ=255) gCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATACCTATTCGCGGCGGCAGCCCCCATATTTATGTAAAACTTGCGCCCGTCGGGCATGTGGGGGAAAAACCGGGCGTGGAACTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCCTTACAGACTATGCCCC‑ACTGCAACCCGGCACGGGTTTTGGCGGCGGG‑TTATTTAATTTTTCCGGGACCGTAAAATATAGTGGCAgg > 1:25718/1‑248 (MQ=255) aTTCGCCTATAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAAGATAGTGGCAGTAGCTATCCa < 2:457768/250‑1 (MQ=255) gcGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCAttt < 1:76632/250‑1 (MQ=255) ccAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTTTGTAAAACTTGCGCCCGTCGTGAATGTGGGGCAAAAACTGGTCGTGGGTCTTTCGCCGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCCACGAGGCTCGGCTTTTGGGGGCGGG‑GTATCTAATTTTTTCGGGGCCGTAAAATATTGTGGGAGGAGCTAttccttttctcccccccacga > 1:421965/1‑230 (MQ=255) aaTGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAAc < 2:140380/251‑1 (MQ=255) tGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAAt < 1:280946/250‑1 (MQ=255) ggCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAAtt < 2:375662/250‑1 (MQ=255) ggTGGCAGCGCCAATGTGTATGTAAACCTTGCGCACGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTATCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCgag < 2:244909/251‑1 (MQ=255) aGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCATACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACgg > 1:384337/1‑250 (MQ=255) gTAAACCGTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCgg < 2:144856/250‑1 (MQ=255) cTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCt > 1:61081/1‑251 (MQ=255) gtgGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCtgtg > 1:150272/1‑249 (MQ=255) gtgGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAg < 2:232773/251‑1 (MQ=255) gTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGCGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCggggg > 2:257368/1‑250 (MQ=255) cGTGGATCTTTAGCCGCAAATCTTTTGCCATAACGATTATCCAGAAACCATTCCAGACTCTGCCAC‑ACTGCAACGAAGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTACTTCCACCCGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGCTAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGTGCATTGCGGGCggggggg > 2:223884/1‑248 (MQ=255) ggATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCgggggggggg > 2:4759/1‑245 (MQ=255) gACGCAAATCTTTTGCCATAACGATTATCCGGAACCCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCCGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGGGGGGCTTTATTTGACGCCTGTGAGAAGTGCGGGCGGGGTGGCGGTTAAAgatg > 2:373933/1‑248 (MQ=255) gACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTg < 1:270/251‑1 (MQ=255) cGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGc < 2:265462/251‑1 (MQ=255) cAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAAGTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTc < 2:421965/251‑1 (MQ=255) aaCGATTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGc < 1:165960/250‑1 (MQ=255) aCGATTATCCGGAAACCATTACAGACTACGCCAC‑ACTGCCACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTCATTTTTCCGGGACCGCAAACTATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGGGGCCGGTGTCGCTTTTTTTGACCCCTGTGAGCAGTGCGGGCGGGGGGGCGATTAAAGCTGGCTCATTAATTGCCGTGCtt > 2:33388/1‑251 (MQ=255) aTTATCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTAtt > 1:181727/1‑251 (MQ=255) aTCCGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGGGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTg > 1:80315/1‑251 (MQ=255) cGGAAACCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGAGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCg > 1:78752/1‑250 (MQ=255) aaaCCATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAg < 2:371060/251‑1 (MQ=255) ccATTACAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGAcc < 1:114848/251‑1 (MQ=255) ccATTACAGACTATGACAC‑ACTGCAACGAGGCTCGGCTTCTGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGGGGCAGTAGCTATCCATTTCCTACCAACAGCGAAACGCCGCGCGTTGTTTAAAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTGTTTGTAGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAACTGGCTCATTAAATGCCGTGCTTATTTTGAgaccgacc > 2:261344/1‑251 (MQ=255) aCAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGGGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACcaacaa < 1:91908/251‑1 (MQ=255) aCAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACcaaca > 1:313974/1‑250 (MQ=255) cAGACTATGCCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCaacaac < 1:174456/251‑1 (MQ=255) | ATTGTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTATCCGGAAACCATTACAGACTATGTCAC‑ACTGCAACGAGGCTCGGCTTATGGCGGCGTG‑TTATCTAATTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAAC > NC_000913/4548802‑4549278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |