| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,914,553 | 0 | A | G | 28.8% | 125.8 / 12.0 | 66 | H216H (CAT→CAC) | glmU | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (16/31); new base G (19/0); total (35/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.43e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCAT > NC_000913/3914310‑3914800 | cACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTTTTCACGCCTTCTACTTT‑GCTTAAAAG‑TTGCGGGTTAACgg > 2:347374/1‑251 (MQ=255)cACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGGTGAACgg > 1:3997/1‑251 (MQ=255) aaCCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCCCGCCCTCTACTTC‑GCTTAAACG‑TTTCGGGTGAACGGcgacg > 2:448016/1‑251 (MQ=255) aCCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCCCCCCTTCTACTTC‑GCTTAAAAG‑TTGGGGGTGGACGGcgacg > 2:143532/1‑250 (MQ=255) gCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTAGTCTCGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCa < 1:68884/250‑1 (MQ=255) aaTTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGCCGATTTCACGcc < 2:57025/251‑1 (MQ=255) gcgATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGTCGACGATTCCACGCCCTTCCTGAt < 2:34993/251‑1 (MQ=255) ccGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTTTTTACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGGTGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGcc > 1:424374/1‑249 (MQ=255) ccGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTCTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑TCTTAAACG‑TTGCGGGTGAACGGGGACGATTTCACGCCCTTCCTTGTA‑CGcccg > 2:315916/1‑249 (MQ=255) cGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCGTCCTGATA‑CGCCAgc < 1:129145/251‑1 (MQ=255) ttGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTTACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGCCGGTTTCACGCCCTTCCTGATA‑CGCCCGCGCCATAATGtt > 1:399646/1‑250 (MQ=255) ccTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGGTGAACGGCGACGATTTCACGCCCTTCCCGGTA‑CCCCACCGCAATTATGTCgggg > 1:436537/1‑249 (MQ=255) cTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCCTTTACTTC‑GCTTAAACG‑TTGCGGGTGAACTGCGGAGATTTTACGCCCTTCCTCATA‑AGCCCGCGCAATAATGTCgggg > 1:52544/1‑248 (MQ=255) cTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGAGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTTTTCACGCCTTCTAACTC‑GCTTTAACG‑TTGCTGATGGACGTCGGCCATTTCACACCCTTCCTGCTA‑CACCAGCGCaataaaggcggagg > 1:242388/1‑242 (MQ=255) gatAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATgtagt < 1:347374/251‑1 (MQ=255) aaCGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTAtt < 2:125687/251‑1 (MQ=255) aaCGTTAGTATCAATTTCAACATCGCGCACGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTTACACCTTTTTCTTC‑GCTTAAAAGATTG‑GGGTGGAAGGCGACGATTTCCCGCCCTTCCTGTAA‑AGCCCGCGCAAGACTGTCGGGGATGTAGTAtt > 2:152853/1‑251 (MQ=255) aGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGccc < 2:353830/250‑1 (MQ=255) gTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTTACGCCTTCTACTTT‑GCTTAAACG‑TTGCGGGTGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGGGATGTAGTATTCTCCCTg > 1:119670/1‑251 (MQ=255) cAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCCGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAAAGGCGACGATTTCACCCCCTTCCTGATA‑CGCCAGCGCAAAAATGTCGGGGATGTAGTATTCGCCCTGAGCattattt > 1:467699/1‑250 (MQ=255) aCATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTTTTCACGCCTTCTACTTC‑CCTTAAACG‑TTGCGGGTGTACGGCGGCGATTTTACGCCCTTCCTTATA‑CCCCCGCGCAATAAATTCGGGGGTGTAGTAtttccccctagccttcttgtt > 2:386337/1‑232 (MQ=255) cATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTAttgttg < 1:107252/251‑1 (MQ=255) gcCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGGTATTCACGCCCTCTACTTCTCCTTAAA‑G‑TTGTGGATGAACGGGGACGATTTTACGCCCTTCCTGATA‑CGCCACCGCAATAAATTAGGTGGTGTAGTATTTTCCCCGAGCATTTTTGTTGGT‑Catc > 2:433897/1‑249 (MQ=255) cccGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATGTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCt < 2:228224/251‑1 (MQ=255) ccGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTTTTTACGCCCTCTACTTT‑GCTTAAAAG‑TTTCGGGTGGACGGCGGCGATTTTACGCCCTTCCTGATA‑CGCCAGCGCCATAATGTTGGGGGTGTTGTATTTGTCCTTAGCCTTATTGTTGGT‑CAACtt > 2:156230/1‑251 (MQ=255) aGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCgccagcca < 1:81865/251‑1 (MQ=255) aCGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGATAAAAGCAGTTTTTCCGCCTGTTCGGACTGATAAACACGCTCCAGCCGGGAGAGTTGCAGGCGGTTATTCACGGCTTCTACTTC‑GCTTAAAAG‑GGGCGGGTGGAAGGGGGCGGTTTCACGCCCTTCCTGATA‑CGCCAGGGGAATAATGTCCGGGGTGTAGGATTCGCCCCGAGCATTTTTGTTGGG‑CAGCTTCGCCCGCCcgcggttt > 1:20249/1‑246 (MQ=255) aaCGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCg < 1:78447/251‑1 (MQ=255) aCGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGt < 2:307301/251‑1 (MQ=255) ggATCGCGCAGCATAACGCCTGCTAACAGCAGTTGTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AAt < 2:436537/251‑1 (MQ=255) gATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGGTTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGGGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCCGCCCGCG‑GTTCATATCTGCGCCGTTGGC‑CATc > 1:279780/1‑251 (MQ=255) aTCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCa < 1:143532/251‑1 (MQ=255) cgcAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTTACGCCTTCTACTTC‑GCTTAAACG‑TTGGGGGTGAACGGCGGCGATTTTACGCCCTTCCTGATA‑CGCCAGCGCCATAATGTCGGGGGTGTAGTATTCGCCCCGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑GTTCATATCTGCGCCGTTGGC‑CATCAGaa > 1:145231/1‑250 (MQ=255) cagcaTAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTTTTTACGCCTTCTTCTTC‑GCCTAAACG‑GTGCGGGTGGACGGCGGAGATTTTACGCCCTTCCTTATAACCCCA‑CGCCATAATTTCGGGGATGTAGTATTCGCCCTGAGCATTATTTTTTGT‑CAGCTTCGCCCACCCGCG‑GTTCATATTTTCGCCGCTGGccacccaacagc > 2:358034/1‑240 (MQ=255) gcaTAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCg < 1:315916/251‑1 (MQ=255) caTAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAAAGGCGACGATTTCACGCCCTTCCTGGTA‑CGCCCGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTTTTGTTGGT‑CCGCTTCGCCAGCCCGCG‑TTTCCTATCTGCGCCGTTGGC‑AATCAGaaatccgg > 1:107067/1‑245 (MQ=255) aaCGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTTACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGGTGAACGGCGACGATTTTACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGGGATGGAGTATTTGCCCTGAGCATTATTGTTGGT‑CAGCTTTGCCAGCCAGCG‑TTTTATATCTGCGCCCGTGGC‑AATCCGAATGCCGgtgg > 1:193427/1‑250 (MQ=255) cagcagTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑GTGCGGGTGAAAGGCGCCGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTTGGTGGTGTAGGATTCCCCCTTAGCCTTATTGTTTGT‑CAGCTTTGCCAGCCCGCG‑GTTCATATCTGCTCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCtta > 2:178953/1‑248 (MQ=255) gTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTTCACCTC‑GCTTAAAAG‑TTGCGGATGAAAGGCGACGATTTCCATCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGGGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAACG‑GTTCATATCTGCGCCGTTGGC‑AATACGAATACCGGTGTTTATCTCCTGAATCTg > 1:184981/1‑250 (MQ=255) tttCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTGCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACg < 2:280062/250‑1 (MQ=255) tCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTTACCCCTTCTCCTTC‑GCCTAAACG‑TTGCGAGTGAACGGCGACGATTTCACCCCCCTCCTGATA‑CCCCCCCGCCATAATGTCCGGGGTGGAGGATTTTCCCCGAGCATTATTTTTTGTACGCCTTC‑CCCGCCAGCGGTTTC‑TTTCTCCGCCGTTGGCCAAT‑AGAATGCCGGTGGTGATCTTCTTAATCTCACgccgcccctcggg > 2:235129/1‑240 (MQ=255) tCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCgg < 1:149225/250‑1 (MQ=255) aCTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTTTTTACCCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGAAGATTTCACGCCCTTCCTGATA‑CGCCCGCGCCATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTTTTTTTGGT‑CAGCTTCGCCCGCCCGCG‑TTTCCTATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGCAGCTGCTCGTCGGTGGc > 1:19996/1‑250 (MQ=255) aaaCACGCGCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTtg < 2:431019/251‑1 (MQ=255) cTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTTTACTTC‑GCTTAAACG‑TTTCGGGTGAACGGCGACGATTTTACGCCCTTCCCGATA‑AGCCCGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCCGCCAGCG‑TTTCATATCTGCGCCGTTTGC‑AATCAGAAAACCGGGGTTGGTCTCCTGAATCTGACGCTGCTCGTCGGGGGGCTCTTTGTGCTcc > 2:253859/1‑249 (MQ=255) cAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTcaacaa < 1:5397/251‑1 (MQ=255) gACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATg < 1:66338/251‑1 (MQ=255) agTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAAc < 1:155436/251‑1 (MQ=255) gCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACttt < 2:133955/250‑1 (MQ=255) gCAGGCCGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACttt < 2:90888/250‑1 (MQ=255) cGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGtt < 1:386337/251‑1 (MQ=255) gTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGtttt > 2:282220/1‑251 (MQ=255) ttATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCATGATA‑CGCCAGCGCAATAATGTCGGAGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGGGCTCCACAATGCCGGTACCTTTGCCGttttt > 2:252195/1‑250 (MQ=255) tATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTc < 1:32526/250‑1 (MQ=255) aTTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCAc < 1:1178/251‑1 (MQ=255) ccTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGAt > 1:174266/1‑251 (MQ=255) ttCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATAc > 2:351855/1‑251 (MQ=255) tCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATAc < 1:448016/250‑1 (MQ=255) ccTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTcc < 1:8312/250‑1 (MQ=255) aCTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCAGCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTc < 1:452145/250‑1 (MQ=255) c‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACCTCCATa > 2:159414/1‑250 (MQ=255) tAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCCGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑ACTCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCgg > 2:384904/1‑251 (MQ=255) gaaaCG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATGCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCGTACGCTGCGCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTGTTCACGGGTGAGACGTCCATAACCg < 2:20249/249‑1 (MQ=255) aaCG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGACAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAAAAATGCCGGTAAATTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTc > 1:418284/1‑251 (MQ=255) ttGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGat > 1:33916/1‑251 (MQ=255) cGGATGAACGGCGCCGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGGTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTTCTCGTCGGTGGCATCTTTGTGCGCAACAATGCCGTTATCTTGGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGatcat < 1:272371/251‑1 (MQ=255) | CACGCAACCGGTGCCAATTTTCACGCGATGACCGAGAGTCACGTTGCCCTCGATGATAACGTTAGTATCAATTTCAACATCGCGCCCGTGAGTTAGCGTACCACGCAGATCAAAACGCGCTGGATCGCGCAGCATAACGCCTGCTAACAGCAGTTTTTCAGCCTGTTCGGACTGATAAACACGCTCCAGACGGGAGAGTTGCAGGCGGTTATTCACGCCTTCTACTTC‑GCTTAAACG‑TTGCGGATGAACGGCGACGATTTCACGCCCTTCCTGATA‑CGCCAGCGCAATAATGTCGGTGATGTAGTATTCGCCCTGAGCATTATTGTTGGT‑CAGCTTCGCCAGCCAGCG‑TTTCATATCTGCGCCGTTGGC‑AATCAGAATGCCGGTGTTGATCTCCTGAATCTGACGCTGCTCGTCGGTGGCATCTTTGTGCTCAACAATGCCGGTAACTTTGCCGTTTTCACGGGTGATACGTCCATAACCGGTCGGATCAT > NC_000913/3914310‑3914800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |