Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,326,450 | 0 | T | G | 37.2% | 82.2 / 11.9 | 52 | G114G (GGT→GGG) | atoB | acetyl‑CoA acetyltransferase |
Reads supporting (aligned to +/- strand): ref base T (4/28); new base G (19/0); total (24/28) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.83e-10 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
AGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTA > NC_000913/2326204‑2326697 | aGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑gg < 1:402105/251‑1 (MQ=255) aaTTAAAGCCGGCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGGGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGTCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGAGTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCTGGGGG‑TA‑T‑GGaa < 2:293167/250‑1 (MQ=255) cgccATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGtt < 1:33838/251‑1 (MQ=255) aaaaaTCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑G‑GGGAAATATGAGGTTAGCCCCCcactttc > 2:376547/1‑249 (MQ=255) aaTCGATTCACAACACGTTGCTGACGAGCTTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGAGCGTCAGGAACTGTTAAAACGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGGTA‑‑‑GGGAAATATGAGTTTAGccccccacctacccc > 2:49851/1‑241 (MQ=255) gATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GGGT‑GGAAAA‑ATGAGGTTGGCCCCCcacttatttgactg > 2:97773/1‑243 (MQ=255) gATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GG‑T‑GGGAAATATGAGGTTAAGCCCCTACTTTCTCGaagg > 2:406078/1‑248 (MQ=255) cGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GG‑T‑GGGAAATATGAGTTTTGCCCCCtcccttctccctgcaaaagaacgcc > 2:219105/1‑227 (MQ=255) gTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑T‑GGGAAATATGGGGTTAGCCCCCTCCTTACTCGATGCAAAAG‑CAAGctc > 1:183407/1‑251 (MQ=255) ttGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑A‑GGTAAATATGAGGTTAGGCCCCCACTTACTCGAGTCAAAAG‑CACGctcc > 2:54638/1‑250 (MQ=255) gaggaAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTg < 2:194577/247‑1 (MQ=255) gTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑T‑GGGAAAAATGAGGTTATCCCCCCACTTACTCGATGCAAAAG‑AACACTCTGGGTAtat > 1:369811/1‑249 (MQ=255) aTTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCt < 1:70954/251‑1 (MQ=255) aTTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑T‑GGGAAATATGAGTTTAGCCCCCCACTTACTCGATGCAAAAA‑CACGCTCTGGTTATCGTCt > 1:249462/1‑251 (MQ=255) tATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCtt < 1:228540/250‑1 (MQ=255) aTGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCGTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTg < 1:279012/250‑1 (MQ=255) tgtTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GG‑T‑GGGAAATATTAGGTTAGCCCCCCACTTACTCGATGCCAAAG‑CACGCCCTGGTTTTTGTCTTTGGGACgggccg > 2:140797/1‑247 (MQ=255) aaGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑T‑TGGAAATATGAGTTTAGGCCCCTAATTAATTGATGCAAAAG‑CACGCCCCGGTTATACTCTTGGGGACGGACAG‑GTTTAt > 2:200938/1‑251 (MQ=255) cGGGCTGGGGCAAAATCCGGCGCGTCAGTCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCTGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGATCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTGATCGTCTTGGAGACGGACAG‑GTTTATGACg < 2:419923/251‑1 (MQ=255) cGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGAGGCGCTTGCCGCCCCGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GG‑T‑GGAAAAAATGAGGTTATCCACCGACTTACTCG‑TGTACAAGATACGCGCTCGTTTTAGTCTTGGAGACGGCCAG‑GATTATGAct > 2:335744/1‑250 (MQ=255) tGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGGAAATATGGGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGTGGACGGACCG‑GTTTATTACGTaaac > 1:307968/1‑249 (MQ=255) ggCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTg < 1:188865/251‑1 (MQ=255) cGGCGCGTCAGTCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGc < 1:185333/251‑1 (MQ=255) gTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGAtg < 2:109401/251‑1 (MQ=255) gCACTGTTAAAAAGCGGGCTGGCAGAAACGGCGTGCGGACTAACGATCACTACCGTCTGTGGTTCCGGACTTTCAAGCGTGACGCTTGCAGCCCAGGCCATTCAAGCAGGTCAGGCGAAGAGCATTGTGGCGGCGGG‑CA‑T‑GGACAATATTAGCCTCTCCCCCTACTTATTCGCTGCAAAAA‑CACCCTCTCGTTATCGCCTTGGAAAAGGGCCGCGTTT‑TGACGTCATCCCGCCCGATGGTCTGACGTgcgc > 1:28900/1‑251 (MQ=255) cACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGcc < 1:360189/251‑1 (MQ=255) ttAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑T‑GGAAAATATGAGGTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCCCTGGTTATCGGCTTTGAGACGGACAG‑GGTTATGACGTAATCCTGCGCGATGGCCCGATGTGCGccc‑cccc > 1:348390/1‑250 (MQ=255) aaaaaGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTGCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGAGGGCCTGATGTGCGCCG‑CCCAt < 2:440138/250‑1 (MQ=255) gCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTAt < 2:78358/251‑1 (MQ=255) gAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGTCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACTGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGAt < 1:308318/251‑1 (MQ=255) ggTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GGTTATGACGGAATCCCGCCCGATGGCCTGATGTGTGCCA‑CCCCTGGTTTTAATATGGGGATTTccg > 1:38295/1‑251 (MQ=255) cGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑TAGGAAAA‑ATGAGGTTAGCCCCCCACTTAACCGATGCAAAAG‑AAAGCCCTGGTTATCGGCTTGGGGAAGGGCAG‑GGGTATGAAGGAATACTGCGCGATGGCCTGATGTGGGCCC‑CCCATGGTTATCATATGGGGGTTACCGGCGaa > 2:377761/1‑250 (MQ=255) cGGATTCACGGTCAATAAAGGATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTGTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCGCTGGTTGTCGTCTTGGAGACGGACAG‑GTTTATGAGGTAAGCCGGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGaaa < 1:53741/251‑1 (MQ=255) cACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTgg < 1:219303/251‑1 (MQ=255) cGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCt < 1:195823/251‑1 (MQ=255) aTAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTGGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAagag < 2:443236/251‑1 (MQ=255) aaaGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGt < 1:272281/250‑1 (MQ=255) atggggTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTTTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCG‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGa < 2:382220/246‑1 (MQ=255) gtgGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAAt < 1:273135/250‑1 (MQ=255) tCGGGTCTTCAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GT‑T‑GGAAAATTTTCGGTTAGCCCCCCACCTACTCCATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGGGACGGACCG‑GGTTTTTACGCAATCCTGCGCGGTGGCCTGCTGGGCGCCA‑CCCATGGTTTTCATATTGGGGTTACCCCCGAAAAACG‑GGCTTAAGAGTAAGGAATTAcccc > 1:331258/1‑250 (MQ=255) ggTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑T‑GGAAAATATGAGGTTAGCCCCCTACTTACTCGATGCAAAAA‑CACGCCCTGGGTATCGTCTTTGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATTGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAATTACCCGTg > 1:13816/1‑250 (MQ=255) aaaaGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑G‑TGAAAAAATTAGGTTAGACCCCCCCTTACTCGATGCAAAAA‑CACGCTCTGGTTTTCGGCTTGGGGACGGGCAG‑GTTTATTACGGAATCCTGCGGGATGGGCCGATGTGCGCCA‑CCCACGGGTTTTATATTGGGGTTAACGCCGAAAA‑CGTGGCCACAGAGGACGGAAATACCCGGGaaaagc > 2:115966/1‑247 (MQ=255) gcgcTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑T‑GGGAAATATGAGTTTTGCCCCCCACCTACTCGATGCCAAAG‑CACGCTCTGGTTATCGTCTTTGAGACGGGCAG‑GGTTATGACGTAATCCTGCGCGCTGGCCTGCTGTGCGCCA‑CCCCTGGGTATCATATGGGGCTTACCGCCGCAAA‑CGGGGCTAAAGAGGACCGCATTACCCGTGAAATGCCGGGTGAACt > 2:96092/1‑251 (MQ=255) gccCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTTCGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACa < 1:40774/251‑1 (MQ=255) cAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTc < 1:313135/251‑1 (MQ=255) aTTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GGTTATGACGTAATCCCGCGCGATGGCCCGATGTGCGCCA‑CCCATGGTTATCATATGGGGGTTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCg > 1:394756/1‑251 (MQ=255) caggcaggTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAAGCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTTGCGCTACATTCACAGCGTa < 2:270805/250‑1 (MQ=255) caggcaggTCAGGCGCAGAGCATTGTGGCGGGGGG‑GA‑TTGGAAAA‑ATGGGCTTAGAACCCTACTTTCTCGAGGCAAAAA‑CCCGCCCTGGGTATTGTCTTGGAGAAGTGCAA‑GTTTATTAAGTGATCCCGCGCGATTGGCTCATGTGCGCCAACCCA‑GGTTATCATATGGGGGTTATCGCCGGAAA‑AGTGGGTTGAGAGTAAGGGATTACCCCTGAAATTCAGGATGAACTGACGCCACCTTAACAGCGTa > 2:99203/1‑250 (MQ=255) gcaggTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGc < 1:140797/251‑1 (MQ=255) gtgGCGGGGGG‑TG‑T‑GGGAAATATGGGTTTTGCCCCCTACTTACTCGATGCCAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGGGCCA‑CCCATGGTTTTCATATGGGGGTTTCCGCCGAAAA‑CGGGGCTAAAGAGTACGGAATTACCCGGGAAATGCAGGAGGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCCCAATTTAGTCCgg > 2:48807/1‑251 (MQ=255) gtgGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACTTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCg < 1:349159/250‑1 (MQ=255) ggg‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTa < 1:236491/251‑1 (MQ=255) | AGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGG‑TA‑T‑GGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAG‑CACGCTCTGGTTATCGTCTTGGAGACGGACAG‑GTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCA‑CCCATGGTTATCATATGGGGATTACCGCCGAAAA‑CGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTA > NC_000913/2326204‑2326697 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |