| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,576 | 0 | T | G | 34.8% | 57.8 / 11.8 | 46 | V288G (GTG→GGG) | cusA | copper/silver export system RND permease |
| Reads supporting (aligned to +/- strand): ref base T (1/29); new base G (16/0); total (17/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.71e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GAAGTAAAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTT > NC_000913/599326‑599822 | gAAGTAAAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGTCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGggt < 1:427173/251‑1 (MQ=255) ggATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATcc < 2:281118/250‑1 (MQ=255) ggATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCg < 1:371692/251‑1 (MQ=255) aTGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTga‑tccggcgatccggc < 1:359371/251‑1 (MQ=255) aTGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACAGCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGGGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGc < 2:330223/251‑1 (MQ=255) aaCCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGA‑TCCTGCGGTCCGGCAAAAACGc > 1:207074/1‑251 (MQ=255) aaCCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGCGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACCTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGCAGCGGCGGGCGGGGGGGTGG‑TCCTgggaccccgcccaaacgc > 2:408952/1‑234 (MQ=255) cAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGA‑TCCTTCGATTCCGCCAAAACgaccc > 1:41118/1‑247 (MQ=255) cggTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCTGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATcg < 2:222976/251‑1 (MQ=255) gatcgaACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGCCCTGCG‑TCCCGCAAAAACGCCCgccgagaggatcccgccgtgg > 2:393775/1‑231 (MQ=255) cgaACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAg < 1:206055/250‑1 (MQ=255) atatatGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑a < 1:342938/251‑1 (MQ=255) atGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGA‑TCCTGCGGTCCGGCCAAAACGCCCCGGAAGGGGTCGCCCCCGGGGAGGACAAACTGGGAACGCTggaa > 1:29910/1‑246 (MQ=255) tGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATGGCGGAATTAAACGCCGAAGGCGAGGTGGCGGGCGGGGGGGGGA‑TCTTGCGGCCCGGCCAAAAAGCCCGGGAAGGGATCGCCCCCGGGAAGGAAAAAATGGAAACGCGG‑aaa > 1:325371/1‑248 (MQ=255) gcgcgcCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTc < 1:224637/251‑1 (MQ=255) atcGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGA‑TTCTGCGGTCCGGCAAAAAAGCCCGAGAAGGGATCGCCGCCCGGGAGGAGCAACAGGGAACGCCG‑AAAAAGAGTCTGCCggg > 1:302510/3‑250 (MQ=255) ggCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGA‑TCCTGCGAACCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGGGAAGGGAAAACTGGGAAAGCTGGAAAAG‑AGTCTGCCGGGAgg > 1:135505/1‑251 (MQ=255) ggCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAgg < 1:122650/251‑1 (MQ=255) cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGG‑TCCTGCGATCCCGCCAAAACGCCCGCGAAGGGATCGCCCCCGCGAAGGACAAACTGGAAAAGCTG‑GAAAGTAGTCTGCCGGGAAGCGTGGGGATAGTTaca > 1:377317/1‑250 (MQ=255) ttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGA‑TCCTGCGATCCGGCAAAAAAGCCCGAGAAGAGAACGCCGCCGTGGGGGGCAAAATGGAAACGCTG‑GAAAGAAGTCTGCCGGGAGGCGGGGGGATAGTTACAACATACgct > 1:313649/1‑249 (MQ=255) aTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGA‑TTCTGGGGTCCGGCAAAAACGCCCGAGAAGTGGTCGCCGCCCTGAAGGACAAAATGGAAACGCCG‑GAAAGTAGTCTGCCGGGAGGAGTGGAGATAGTTTCAAAATaagaacgc > 1:278799/1‑244 (MQ=255) ccaTCGTTTTAAAGGCCAGTTAAAATGGCGTGCCCGTTTATCTGGGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAGCTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATCGTTACAACATACGATCGcagc < 2:198675/250‑1 (MQ=255) tttAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTc < 2:412399/250‑1 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATc < 2:154431/251‑1 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGG‑TCCTGCGATCCGGCAAAAACGCCCGGGAAGGGATCGCCGCCGTGGAGGACAAACTGGAAAAGCTG‑GAAAGTAGTCTGCCGGAAGGGGTGGAGATAGTTACAACAAACGATCGCAGCCAGCTCCTTTACCGCGCCATc > 1:228529/1‑251 (MQ=255) gTGCCCTTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGGGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCt < 2:259140/251‑1 (MQ=255) cccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAg < 1:160330/251‑1 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGtt < 2:115304/249‑1 (MQ=255) tGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGA‑TCCTGCGATCCGGCAAAAAAGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTGGAAAAGCTG‑AAAAGTAGTCTGCCGGAAGGCGGGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCCTCCACAACCCCCGCGGCAAGTTGCTGGa > 1:122521/1‑249 (MQ=255) gCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGtt < 2:54047/251‑1 (MQ=255) cGAAGGTCCAGATGGGCCCGGAGAGGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGttt < 2:272239/251‑1 (MQ=255) gAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAACCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCGCAGCGGCAAGTTGCTGGAAGAGTTTa < 2:147752/251‑1 (MQ=255) tGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGCAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAAATGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGGGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACCACCCCCGCGGCAAGTTGCTGGAAGAGGTTaagatagggag > 1:72075/1‑239 (MQ=255) tGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCGGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTa < 2:72075/239‑1 (MQ=255) gaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGTCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCtgtg < 1:308016/251‑1 (MQ=255) cgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCGCAGCGGCAAGTTGCTGGAAGAGTGTATTGTGGTGGCGGTAGGCTGTGCGCt < 2:266203/251‑1 (MQ=255) gcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGTAGATAGTTACAACAGGCGAGCGCAGCCAGCTCATTGACCGCGCCATGGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGTTGGCAGTATTCTATGCGCTg < 2:49317/251‑1 (MQ=255) cGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGtt < 2:228529/251‑1 (MQ=255) cGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGA‑TTCTGCGAAACGGCCAAAACGCCCGAGGAGTGATCGCCGCCGTGAAGGACAAAATAGGAACGCTT‑AAAAGGAGTCTGCCGGGAGGCGGGGGGATAGTTATAACATAAGATCGCAGCCAGCTCATTGACCGCGCCCTCGCCAACCCCAGCGGCAAGGTGTTGGGAGAGTTTATTTTGGTGGGGGGAGTCTGTGCGCTGtt > 1:465593/1‑251 (MQ=255) tGCCGAACTAAACGCCGAAGGCGAAGTGGCGGGCGGGGGGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAAATGGAAAAGCTG‑AAAAGTAGTCTGCCGGAAGGGGTGGGGATAGTTACAAAAAACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAAACTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGGGGGAGGCTGTGCGCTGTTTCTCTggg > 1:347624/1‑250 (MQ=255) aaaCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTgcg < 1:393775/249‑1 (MQ=255) gaaggcgaagTGGCGGGCGGGGGGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGGAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACCACCTCAGCGGCAAGTTGCTGGGAGGGTTTATTGTGGTGGCGGTAGTCTGTGCGGTGTTTCTTTTGCATGTGCGCTCGgcgcc > 1:440562/1‑250 (MQ=255) aggcgaagTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCtgg < 1:16905/251‑1 (MQ=255) gaagTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGc < 1:45745/251‑1 (MQ=255) gTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGat < 2:440562/251‑1 (MQ=255) ggcgggcgGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGatt < 1:175082/250‑1 (MQ=255) ggggTGGTGA‑TCCTGCGATCCGGCAAAACCGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGtt < 1:201358/251‑1 (MQ=255) | GAAGTAAAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGA‑TCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTG‑AAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTT > NC_000913/599326‑599822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |