Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,293,326	IS1 (–) +9 bp	intergenic (‑404/‑193)	hns ← / → tdk	DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	257908 =	NA (NA)	22 (0.790)	21/488	0.4	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 1293334	0 (0.000)					intergenic (‑412/‑193)	hns/tdk	DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase
*	?	NC_000913	1293326 =	0 (0.000)	24 (0.860)	23/488	0.3	100%	intergenic (‑404/‑201)	hns/tdk	DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase
	?	NC_000913	= 1979270	NA (NA)					noncoding (1/768 nt)	IS1	repeat region

CCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTA  >  NC_000913/1293090‑1293575                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                          ccTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTGAAAGATTGTGggtaat                                                                                                                                                                                                                                             >  1:212581‑M2/1‑245 (MQ=255)    aTTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTTATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGTGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatga                                                                                                                                                                                                                                           >  1:26306‑M2/1‑242 (MQ=255)    aTTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgac                                                                                                                                                                                                                                          <  1:50854‑M2/251‑10 (MQ=255)         cacCGATGAATTCGCAGCACGTGCGATTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGCCCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCACCAGGTTAAAGCTTGTGggtaatgactcca                                                                                                                                                                                                                                      <  2:279649‑M2/250‑14 (MQ=255)          caatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACcagc                                                                                                                                                                                                                                      <  2:108064‑M1/22‑1 (MQ=255)           aatgattttctggtgcgtaccgggttgagaagcgttgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgaggtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggaaggacagctgatagaaacagaagccgctggagcacctcaaaaacgccagcatacacgaattcagtaagttggcggcatcaccAAGATTGTGAATAATTAGCAGCAGt                                                                                                                                                                                                                                   >  2:188278‑M1/227‑251 (MQ=255)                gatTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattg                                                                                                                                                                                                                              <  1:234574‑M2/251‑22 (MQ=255)                   ttCGCAGCACGTGATGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGATCATGTACTTAGTATTGCACTATCTCCTGGAGGTCATCAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGgggaatgactccaacttattgat                                                                                                                                                                                                                            >  2:280197‑M2/1‑227 (MQ=255)                       gtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCt                                                                                                                                                                                                                       >  1:105919‑M1/215‑251 (MQ=255)                               cgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACaa                                                                                                                                                                                                               >  2:50219‑M1/207‑251 (MQ=255)                               cgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACa                                                                                                                                                                                                                <  1:62977‑M1/44‑1 (MQ=255)                                        aCTTCCTGATCCATGTCACATTTTATGGGGAGATTCTCCTACGCTGACGACCTTTAAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGAATTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGATATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatg                                                                                                                                                                                                      <  2:120910‑M2/251‑46 (MQ=255)                                                 ttCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac                                                                                                                                                                                             <  1:221293‑M2/251‑55 (MQ=255)                                                          gcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCa                                                                                                                                                                                      >  2:9242‑M1/180‑249 (MQ=255)                                                             tttATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                                                                                                                                  >  2:50854‑M2/1‑185 (MQ=255)                                                                 tGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                                                                                                                                                             <  1:131327‑M2/251‑71 (MQ=255)                                                                     gagaTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTCGTTCTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACCGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                                                                                                                                                                         <  1:127087‑M2/251‑75 (MQ=255)                                                                       gaTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                                                                                                                                                                       <  1:60133‑M2/251‑77 (MQ=255)                                                                                aGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                                                                                                                              >  1:256244‑M2/1‑166 (MQ=255)                                                                                     agcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACaa                                                                                                                                                                                                               >  1:247391‑M1/153‑197 (MQ=255)                                                                                     agcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACaa                                                                                                                                                                                                               <  2:247391‑M1/45‑1 (MQ=255)                                                                                                           ggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCCCTTCtgtg                                                                                                                                   >  1:46462‑M1/131‑251 (MQ=255)                                                                                                             aGTTGTGTTTACGAGAATTCCCTATTAAGCGACTGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                                                                                                                                   <  1:213908‑M2/249‑113 (MQ=255)                                                                                                              gTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccagg                                                                                                                                <  1:125289‑M2/251‑116 (MQ=255)                                                                                                                 gcgtttgccgttacgcacccccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACt                                                                                                                             >  2:210529‑M1/125‑251 (MQ=255)                                                                                                                               gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGaaaaa                                                                                                               >  1:140522‑M1/111‑251 (MQ=255)                                                                                                                                     ccccgtcagtagctgaacaggagggacagctgatagaaacagaagccacgggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATAGACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACg                                                                                                         >  2:217110‑M1/105‑251 (MQ=255)                                                                                                                                            agtagcggaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacaAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGATGAATTATg                                                                                                  >  2:24086‑M1/98‑251 (MQ=255)                                                                                                                                             atgatgAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccatgtgctgcctcagattcaggttatgccgctcaa                                                                                                 >  1:98707‑M2/1‑105 (MQ=255)                                                                                                                                                   gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATaaa                                                                                             >  1:64728‑M1/91‑249 (MQ=255)                                                                                                                                                   aaaaGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgct                                                                                           <  2:202501‑M2/251‑153 (MQ=255)                                                                                                                                                            gtacagctgatataaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTTAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTTAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAAc                                                                                  >  1:111492‑M1/82‑251 (MQ=255)                                                                                                                                                                        agagCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgatta                                                                      >  2:146365‑M2/1‑78 (MQ=255)                                                                                                                                                                         aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATc                                                                     <  1:108042‑M1/183‑1 (MQ=255)                                                                                                                                                                           gcatgcagtaagcgttgaactatctccaggATGCCAACAGCAGGCTATTACTTGCGAAACAGGTTAACGATTGTGggtaatgactccaactcattgatagtgttttatgttcagataatgcccgatgactttgccatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattccggttatgccgctcaattcgctgcgtatatcgcttgctgcttacgt                                                                   <  2:162874‑M2/237‑177 (MQ=255)                                                                                                                                                                           gCATGGACTTAGTATTGCACTATCTCCTGGAGCTCAACACAGGGCTATTACTTGCGCAACAGGTTAAAGATTGAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgt                                                                   <  1:163597‑M2/251‑177 (MQ=255)                                                                                                                                                                                 aCTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagct                                                             >  1:218274‑M2/1‑69 (MQ=255)                                                                                                                                                                                      tggagcacttcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCCGCCATTTACCCGCTTATAACAAGCGGGGCAGTTGTAATGATAGCTCAGAAGGCTTATGCAAGGCTTCGTAAGGGAGAACGCATATCCCTACTTCTGTGCACACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTACATATAATTGAGGGCCtgt                                                        <  2:4690‑M1/196‑1 (MQ=255)                                                                                                                                                                                         agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCTGTGGc                                                     >  2:64991‑M1/53‑251 (MQ=255)                                                                                                                                                                                                caaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGc                                              <  1:200726‑M1/206‑1 (MQ=255)                                                                                                                                                                                                  aaaacaccatcatacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGACAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGcac                                            >  1:123244‑M1/44‑251 (MQ=255)                                                                                                                                                                                                              tacactaaatcagtaagttggcagcatcaccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTct                                <  1:133317‑M1/220‑1 (MQ=255)                                                                                                                                                                                                                                         caccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCtgt                                                        >  1:6667‑M1/5‑200 (MQ=255)                                                                                                                                                                                                                                         caccAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCtgt                                                        <  2:6667‑M1/196‑1 (MQ=255)                                                                                                                                                                                                                                          accAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTc    <  1:40381‑M1/248‑1 (MQ=255)                                                                                                                                                                                                                                             aaGATTGTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatacgtcatccatatcaccacgtca  <  2:236036‑M2/250‑242 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                          CCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCCACTTCTGTGCATACTGTTGAGCTGAAAAACTGACGAATTATGATAAACTCCAGCCAACTTTATTTCATATCATTGAGGGCCTGTGGCTGATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTA  >  NC_000913/1293090‑1293575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.