| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,477,265 | 0 | A | C | 37.5% | 85.1 / 13.2 | 56 | L122* (TTA→TGA) | dsdC | DNA‑binding transcriptional dual regulator DsdC |
| Reads supporting (aligned to +/- strand): ref base A (6/29); new base C (21/0); total (27/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.20e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGG > NC_000913/2476969‑2477550 | gcgcCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGTGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATg < 2:315989/300‑1 (MQ=255) aCTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCac < 1:235890/300‑1 (MQ=255) gCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTNTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCaccaacc < 2:154792/300‑1 (MQ=255) tCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCAt < 1:330455/300‑1 (MQ=255) cGTACCTGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGc < 2:591955/300‑1 (MQ=255) cGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATag < 1:356189/300‑1 (MQ=255) gCTCCATGCCTGTCTGTCATTGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTNCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGa < 1:477942/300‑1 (MQ=255) gCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCCCATGCGGGCACCAACCAGCATTGGGAGATAGAGGGACGGGa > 1:55803/1‑300 (MQ=255) gCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTNCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGa < 1:477948/300‑1 (MQ=255) cTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGTCGTGTAAAGTCACCCAATGCGGGCACCAACCAGCACTGGGTGATAGAGGGccaggga > 1:67998/1‑295 (MQ=255) tgtcATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACg < 1:526844/300‑1 (MQ=255) gtcATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGGAAAATCCCCCCCTACAGGCACCAACCAACATTGGGAGATAGAGGGGCGGGAACACAGAGGTAACGt > 1:297903/1‑300 (MQ=255) tcATGGAACAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAATTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGtc < 2:122734/300‑2 (MQ=255) gCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCCCACGCGGGAACCCACCAACCCTGGGGGATAGAGGGACAGGAATACAGCGTTCACGTTCCCAATa > 1:491709/1‑300 (MQ=255) cGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTc < 1:6811/300‑1 (MQ=255) gTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTGCAATCACCCCCTGCGGGCACCCACCAGCCTTTGGGGAGAGAGGGAAGGGAATACAGAGTTCACATTCCCTATCACTcccgact > 1:151860/1‑295 (MQ=255) ccGTGTTGGTTAAAGCGTGTCTTTGAGCGTATTCCGTGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTTAGTTGCGCTGACGGCGCATCATCAAATTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATGACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAAttt < 2:354216/300‑1 (MQ=255) ggTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCCATGCCGGCACCAACCCACACTGGGCGGTAGAGGGCAGGGAATCCCGAGTTACCCCTCCCACTAACCCCTGATTTTTGACGTCAAGAATTTCCTTGtt > 2:338560/1‑300 (MQ=255) tGTCTTTGAGCGTATTCCGTGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATcc < 2:59670/300‑1 (MQ=255) tGTCTTGGAGCGTATTCCGTGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAAATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATcc < 2:74291/300‑1 (MQ=255) aGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCCCCTCATGTTGGCACCCACCAACCTTGGGAGAGAGGGGGACGGGAATACCGAGTTAACGTTCCCAACCCCCCCTGATTTTTGATATCGAAAATCTCCTGGTTTAGGGTATCCAGcgacgg > 2:319261/1‑299 (MQ=255) tATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCCCCTCACTCGGGCACCCCCCAGCACTGGGCGATAGAGGGACGGGAATACAGAGTTAACATTCCCTATAACTCCCAATTTTTGACATCAAAAATTTCCTGGTTCCGGGTATCCCGCGACGAtgtt > 2:347004/1‑297 (MQ=255) gggCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTACAATCCCCCAACACAGACACCAACCCACCCTGGGCAATAGGGGGACGGGAACACCAAGTTCACATTCCCCATCGCTTCCGATTTTTTATATTAAGAACTTCCTGGTTTAGGGTATCCCGCGACGAttttcgctca > 2:59108/1‑294 (MQ=255) gggCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAAGCACCCCACGCGGGCACCCACCAACATTGGGAGATAGAGGGCCAGGAATACAAAGTTAACATTCCCGATGAATCCTTATTTTTGATCTCCAAAATTTCCTGGTTTCGGGTATTCCGCAACGATTTTcgcggc > 1:299831/1‑298 (MQ=255) cTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGACTGACGTTGTCATTACCAGTGAGCCCGGTGAGCGAAATAGACGGATACCGGCGTGGAAAAGCNCCTAACGCGGGCACCAAACAACCTTGGGCGATCGAGGGACGGGAATCCAGAATTGACGTTTCCGACGACTCCCGAGTTTTGATGTCAAAGAGTTCCTGGTTCAGAGTATCCAGCGACGATTTTCGCGACCaa > 2:161223/1‑300 (MQ=255) ggCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCCCCCCCCGCGGGCACCCACCAACATTTGGTGATAGAGGGACAGGAACACAGAGTTAACATTCCCGATAACTCCTGATTTTTTATCTCCCGAATTTCCTGGTTTAGGGTATCCAGCGAAGATTTTTGTGCCCAACaaaaacat > 1:7205/1‑295 (MQ=255) ggCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCCCCGCGGGCACCAACCAACATTGGGAGATAGAGGGACGGGAATACCAAGTTCACGTTCCCAATAACTCCCGGTTTTTTATATCCAGAATTTCCTGGTTCCAGGTATCCAGAGAAGAGTTTCGCGCCCAAGAAACACGt > 1:525692/1‑300 (MQ=255) aTTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGNGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTcccc < 1:472781/300‑1 (MQ=255) gtTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCCCCCCATGCGGGCCCCCACCCGCCTTGGGCGGTAGAGGGCCGGGAATACCGAGTTCACGTTCCCAATAACTCCTGATTTTTGATATCCAGAATTTCCTGGTTTCGGGTATCCCACGACAATTTTCGCGCCCCATAAACACATTTCCCCTCTTGCGTTCATTCCCCTTTGCGATGGgaac > 1:538867/1‑300 (MQ=255) catcaAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCCCCCCCCCCGGGCACCAACCCACCTTGGGCGACAGAGGGACGGGAACCCAAAGTTCACGTTCCCAACACCCCCTTATTTTTGATATCCAGAATTTTCTGGTTCAGGGTCTCCCGCGACGATTTTGGCGCCCAACAAACACGTTTCCCCTCGTGTGTTAATTCCCATTTGTGATGGGAAAAAACAAAC‑AAATGAATG‑c > 2:118671/1‑300 (MQ=255) catcaAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCCCACGCGGGAAACAACCCGCCTTGGGGGATCGAGGGAAGGGAACACAGAGTTCACATTCCCAATCACCCCTGATTTTTTATATCCAAANTTTCCTGGTTCAGGGTATCCAGCGACGATTTTCGCGCCCCACAAACACTTTTCCCCTCGTGCGTTAATTCCACCTTGCGATGGgaaaagaaaaaaaaatgaatga > 2:584495/1‑281 (MQ=255) gTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAAttc < 1:303874/300‑1 (MQ=255) aCGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTg < 1:494470/300‑1 (MQ=255) ttGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCCCATGCGGGTACCAACCAACATTGGGTGGTAGAGGGCCGGGAATACAGAGTTCACATTTCCGATCACTCCTGATTTTTTGTCTCAAGAATTTCCTGGTTTCGGGTATCCAGCGACGACTTTAGCGCCCAACAAACACATTTCCCCCCGTGTGTTAATTCCCCTTTTCGATGGGAAAGAACAAAA‑AACCTAATG‑CCCAATTCTTTTTTCAGCtgatttacgcggtggct > 2:187056/1‑288 (MQ=255) ttGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCCACGCGGGAACCCACCCACCTTGGGTGATAGAGGGACAGGAACACCAAGTTCACATTCCCAATAACCCCTGATTTTTTATATCAAAAACTTCCTGGTTTCGGGTATCCAGCGACAATTTTCGCGCCCAACAAACACGTTTCCCCCCATGTGTTCATTCCCCCTTTCTATGGGGACGAACAAAC‑AACCTAATGTCCCATTTTTTCTCCCA‑CTGATTGATGCGGTGaac > 2:511117/1‑298 (MQ=255) tGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACtt < 1:85648/300‑1 (MQ=255) gATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCg < 2:7202/300‑1 (MQ=255) gATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCg < 1:137194/300‑1 (MQ=255) aTTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGCGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGc < 2:631297/300‑1 (MQ=255) tGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCAc < 1:644775/300‑1 (MQ=255) cGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTGATTCCACTTTGCGATGGGAACGAACAAAC‑AACTAAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGCGACGTACCGCACTgg < 2:65110/300‑1 (MQ=255) gTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTCACGTGGGCACCCACCAACATTTGGTGGTGGAGGGACAGGAATACAAAGTTCACATTCCCAATAACTCCTGGTTTTTGATATCCAGAACTTCCCGGTTCCAGGTATCCAACGAAGATTTTAGCGCCCAACCAACACGTTTCCCCTCGTGCGTTCCTTCCACCTTGTGATGGGGACGAAAAAACCAACTGA‑TG‑TCCAATCTTTCTTCCAGCTGGTTGATACGGTGaactacagcaccagggct > 2:334776/1‑283 (MQ=255) gTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCCCATGCGGGCACCAACCAACACTGGGCGATGGAGGGCCGGGAATACAAAGTTCACATTCCCAATAACTCCTGATTTTTTATATTAAAAACTTCCTGGTTTAGGGTATCCAGCGACGAGTTTCGCGCCCCACAAACACATTTCCCCCCATGCGTTCACTCCACCTTTTGAGGGGAACGAACAAAA‑AAACGAATG‑CCCAACTCTTCTTCCAACTGATTGATACAGTGAATTCCCGCACTGGGGCt > 1:3541/1‑300 (MQ=255) gTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCCCCCCATGCGGGAACCAACCAACATTGGGTGACAGAGGGACAGGAATACAAAATTAACATTCCCAATCACCCCCGATTTTTTATATCAAGAATTTCCTGGTTCCGGGTATCCCGCGACAATTTTCGCACCCAATAANCACATTTCCCCCCGTGTGTTCATTCCACCTTTTGATGGGAAAAAACAAAC‑AACTTAATG‑CCCAATTTTTCTTCCCGCTGATTGATACGGTGGATTCCCGCCCTggggat > 1:475522/1‑298 (MQ=255) gTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCCACGCGGGCACCCACCAACACTTGGAGATAGAGGGACAGGAATCCAAAGTTCACATTCCCGATCACCCCCGATTTTTTATATCCAAAACTTCCTGGTTCCAGGTATCCCACAAAGAGTTTAGCGCCCAACAAACACATTTCCCCCCTTGTGTTCATTCCACCTTTCGATGGGAAAGAAAAAAC‑AACCGAACG‑CCCAACTCTTCTTCCAGCTGATTGATACAGTGAATTCCCGCACCggggtt > 1:540375/1‑298 (MQ=255) tCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTc < 1:28597/300‑1 (MQ=255) gTGAGCACGGTGAGCGAAATAGACGGATACCGGGGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAAt < 1:601487/300‑1 (MQ=255) gAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCACCCCCTGCGGGCACCCACCAACCCTGGGAGAGAGAGGGACAGGGATACCAAGTTCACGTTCCCAATCACTCCTGATTTTTGATGTCCAAAACTTCCTTGTTCAGGGTATCCAACAACGATTTTCGCGCCCACTAAACACGTTTCCCCTCGTGCATTAATTCCACTTTGTAATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAACTTATTGATGCGGTGGCTTCCCGCACTtgggatccgagaaaattc > 1:288949/1‑286 (MQ=255) aGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAATCCCCTCCTGCGGGCACCAAACAACACTGGGTGATGGAGGGACGGGAATACAGAGTTCACATTCCCAATCACCCCTGATTTTTTATATCCAGAATTTCCTGGTTTAGGGTATCCCACAACAATTTTCGCGCCCAATAAACACGTTTCCCCCCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCCATTCTTCTTCCCGCTGATTGGTGCGGTGGATTCCCGCACTGGGGCTCAGCGACAACTcc > 1:108357/1‑300 (MQ=255) aGCGAAATAGACGGATACCGGCGTGTAAAGGCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTgccgcc < 2:112931/300‑1 (MQ=255) aaTAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGNGCGATAGAGGGCCGGGAATACAGAGTTCACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGc < 2:485408/300‑1 (MQ=255) aaTAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATAGCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGc < 2:512480/300‑1 (MQ=255) ccGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCGAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATg < 2:120244/300‑1 (MQ=255) ggCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGcc > 1:57408/1‑300 (MQ=255) gtgtAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGCAGGACTGATGCCTgg > 1:111518/1‑300 (MQ=255) gtgtAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTgg > 1:376484/1‑300 (MQ=255) | GCGCCCAACTATGCCATTCATCCGTACCGGAGTCGTTGCTCCATGCCTGTCTGTCATGGAGCAACGTACAGTGACACAGGTTAATTACCGTGTTGGTTAAAGCATGTCTTTGAGCGTATTCCGGGCTACATACTGGCAGGATTTCTTCATCCATCAGAAAGTGATGAGTGAGTTGCGCTGACGGCGCATCATCAAAGTAGATCGCCAAATCGATTCCGGCACGTTGCAGATTGACGTTGTCATTACCAGTGAGCACGGTGAGCGAAATAGACGGATACCGGCGTGTAAAGTCACCTAATGCGGGCACCAACCAGCATTGGGCGATAGAGGGCCGGGAATACAGAGTTAACGTTCCCGATAACTCCTGATTTTTGATATCAAGAATTTCCTGGTTCAGGGTATCCAGCGACGATTTTAGCGCCCAATAAACACGTTTCCCCTCGTGCGTTAATTCCACTTTGCGATGGGAACGAACAAAC‑AACTGAATG‑CCCAATTCTTCTTCCAGCTGATTGATACGGTGACTTACCGCACTGGGGCTCAGCGACAATTCCTCTGCCGCCAGGGCGAAGGACTGATGCCTGG > NC_000913/2476969‑2477550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |