New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2817942 | 50 (0.560) | 4 (0.050) | 4/558 | 8.5 | 9.7% | intergenic (‑82/+117) | argQ/argZ | tRNA‑Arg/tRNA‑Arg |
? | NC_000913 | 2818078 = | 28 (0.330) | noncoding (58/77 nt) | argZ | tRNA‑Arg | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
ATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCC > NC_000913/2817800‑2818377 | aTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTc < 1:39812/300‑1 (MQ=255) cGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATcc < 1:283923/300‑1 (MQ=255) cGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTg < 1:112662/300‑1 (MQ=255) cGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTAGTGCCTGCGGTTACTCCCGCTACCTCTTCCATACCTTCATTGCTGAAGATTTAGAAGAACATGGTGAATCCGGGA‑GGATCCGAAACCCAGACCGCTGGGTTTGTAGCTGCGTACTCTATCCA‑GCTGA‑GCtgg > 2:331185/1‑298 (MQ=17) cGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTACTTCCGCTACCTCTTCGATACCTTCATTGCTGACGACTTCAGAAGATCCGGTGCATCCAGGC‑TGATTCGGACCTCCGACCGCTCGGTTCGTAGCAGAGTACTCTATCCA‑GATGA‑ggtaa > 1:231973/1‑296 (MQ=18) cGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCATAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGGTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCCATcacgatgagccgc > 2:651814/1‑288 (MQ=255) gTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATAGTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGa < 1:597208/300‑1 (MQ=255) tgctctagtgggatgggCTAAGGATGCATCGGGAAAATTTATGCTACTGCTGGGAGCGATACCGATGCTGGAGCTATATCAGTTAGGGAAGGGTGCATACGGGAGGATTACGCGCCTTGCTGCTCGCCCTTCGGGCCGTTGCTGAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATGCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGAt < 2:103425/284‑1 (MQ=17) aCTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTACTCCCGCTACCTCTTCAATACCTTCACTACTAAAAACCTCTAAGAACATAATGCA‑CCAAAACAGACTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATg > 1:564179/1‑300 (MQ=17) aCTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTAACGCTGATATTGATAACGCTACTCAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTCCCGCCACCTCTTCCATACCTTCATGGCTGAA‑AGTACGTAGGATGTGGTGCATCCTGGA‑GGATTCGAACCTCCCAACGCCCGGTTCGTAGCTGAGTACTCTATcccagtgagctgcagatgc > 2:312124/1‑283 (MQ=11) ctATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCac > 2:619683/1‑299 (MQ=255) gCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCATTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTAGGAGAATATGGTGCATGCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCACCgggcggtgagg > 2:670430/1‑292 (MQ=255) gcgtATTCTACTGCTGATAGTGATACCGCTACTAAAGCCATATCGATTAAGAGAGGGTGCATCCGGGGGGATGACGCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATAc < 1:115698/297‑1 (MQ=255) ctactaAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCCTCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑ACTACGAATACACCGGAACATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAagagg > 1:229748/1‑299 (MQ=255) actaAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTACTTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTAGAAGAATGTGGTGCCTCCGGGG‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCAGAGCACTCTATCCA‑GCTGA‑GTTACGGATGCATCGGGAGGTTGATTTTAATGCTGACCCTGATACCGctactcaaccaacatcccgccagagatg > 2:396814/1‑277 (MQ=17) actaAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTAGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCAACCGCTCGGTTCGTAGCAGAGCACTTTATCCA‑GCTGA‑GCTAAGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATg > 1:227730/1‑300 (MQ=255) gagaTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCATAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGa > 1:136549/1‑300 (MQ=255) ggaTTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGGTACCGCTACTCAAGCCATATCACGCCAGAGATGGTGCATCCGGGAGGATTCGCACCTCCGCCCGCTCGGtt > 1:378210/1‑300 (MQ=255) cTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGc < 1:665158/300‑1 (MQ=255) tgctgCTCGCCCTTCGGGCCGTTGCTAGAGCAACGTTATCATCCCTAGTGCCTGCGGTGAATTCCGCTACCTCTTCGATACCTTCATTGCTTAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTAc < 1:66926/296‑1 (MQ=255) ccTTCTGGCCATTGCTAAAACAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGTAGAATATGGTGCATCCTGGA‑GGATTCGAACCTCCGACCGCTTGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGc < 2:401620/300‑1 (MQ=255) aCGTTATCCTTCCTGGTGCCTGCGGTTAATACCGCTACCTCTTCGATACCTTCATTGCTGAAGATTCCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTAATGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACAGATGCATCGGGaa > 1:197249/1‑300 (MQ=255) gATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTACAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATAGGGAAACTTACTTTACCTCCGATTTTTTGATACCGCTACTAAAGCCGTa > 1:366834/1‑300 (MQ=255) tgctgacagtttaggacaaTATGGTGTATCCGGGA‑GGATTCGAACCTCCGACTGCGCGGTTCGTAGCCGAGTA‑T‑TATACACGTAGAAGTGGCAGCTACAGTGCGAAATTTAGGTTACTGCCGATATTGATACCACTACTAAAGTCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAagag < 2:340345/283‑1 (MQ=12) tgctgaaggtggctgagaATATGGTGCGTCTGGGA‑GGATTCGAACCTCCAACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCGGA‑GCGACGGATACATCGGGAAAGTTATTTTACGGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAagag < 2:57786/286‑1 (MQ=25) gCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTACAGCCATATCACATAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGCCCACTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGTTACGGATGCACAGGGAAGCTTATTTTACCGCCGATTTTCTGATACTGATACTAAAGCCGTATCaaatcagaag > 2:84808/1‑292 (MQ=18) gCTGAAGATTTCGGAGAAGATGGGGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGTTTCGTAGCCGAGTACTCTATCCA‑GCGGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAgaga < 2:196311/300‑1 (MQ=255) taaTAGGGTGCATCCTGGA‑GGAGTCGAACCTCCAACCACGCTTTTCTTAGCCGAGTACTTTATCCA‑GATGA‑GCGACGGATGCATTGGGAAATTTATTTTACTGCTGATATTGATACCGCTAATAAAGCCAGATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGggag < 2:533315/299‑1 (MQ=21) gggA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCCGACTTTTTGATACCGCTACTAAAGCCGTATCCAATAAGAGATGTTGCATCCGGGAGGATTACTCGCCTTGc > 1:11572/1‑300 (MQ=255) cGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGccc < 1:631737/300‑1 (MQ=255) | ATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGA‑GGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCA‑GCTGA‑GCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCC > NC_000913/2817800‑2818377 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |