| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 640,502 | C→A | L250L (CTC→CTA) | ahpF → | alkyl hydroperoxide reductase, AhpF component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 640,502 | 0 | C | A | 98.5% | 203.9 / ‑5.5 | 65 | L250L (CTC→CTA) | ahpF | alkyl hydroperoxide reductase, AhpF component |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (33/31); total (34/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.70e-01 | |||||||||||
TGGGCGTTCCGGCAGTGTTCGTAAACGGGAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTCGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGGCGCAACATGAACGTTCCG > NC_000913/640258‑640748 | tGGGCGTTCCGGCAGTGTTCGTAAACGGGAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCCATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATAcc > 1:224317/1‑251 (MQ=255) gggCGTTCCGGCAGTGTTCGTAAACGGGAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAATGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATAcc < 1:261824/250‑1 (MQ=255) ggCAGTGTTCGTAAACGGGAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTTCTCCGCACGTATAGGCCTCCGTACCGGTCTGATGGGCGAAAGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑g > 1:168897/1‑251 (MQ=255) aCGGGAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCCATTTACTCCCCACGGAAAAGCCTTCCTACCGGGCTGATGGGGGAACGTTTTGGTGGTCAGATCCTAGATACCGtttgatcggacgagggtcggtgt > 2:177614/1‑230 (MQ=255) aCGGGAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGtt < 1:177614/230‑1 (MQ=255) ggAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTa < 1:228541/251‑1 (MQ=255) gaggttGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCAGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTGCCGaa < 2:83455/247‑1 (MQ=255) gTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGa < 2:35406/251‑1 (MQ=255) cAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGGGCAGCGGCAGCAATTTACTCCGCACGTAAAAGCATCCGTACCGGTCTGATGGGCGAAAGTTTTTGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAAATACATTTCTGTACCGAAGACTGAAgg > 1:91857/1‑251 (MQ=255) aGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGGGCAGCGGCAGCCATTTACTCCGCACGTAAAGGCATCCGGACCCGGCTGGTGGGCGAACGTTTTGGTGGGCATATCCCAGATACCGGTGCTATC‑GGAAAATACATTTCTGTACCGaaacatggaggg > 2:324274/1‑241 (MQ=255) aCGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGc < 1:119338/251‑1 (MQ=255) cTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGGAGCAATTTACTCCGCAAGTAAAGGCATCCGGACCGGTCTGATGGGCGAAAGGTTTGGGGGTCAGATCCCAAATACCGGTGATATC‑GAAAACTCCATTTCTTTACCGAAGACTTAAGGGCAGAAGCTGGCAGGCGCCCTGAAAGGTCACGTtggtgacaac > 2:298910/1‑247 (MQ=255) tGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGCTGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGGGCCGCGGGAGACATTTACTCCGCACGTAAAAGCATCCGTACCGGGCTCATGGGCGCACGCTTTGGTGGTCAGATCCTCGATACCGTTGATATC‑GAAAAATACATTTCTGTACCGAAGACTGAAGGGGCGAAGATGGCAGGCGCACTGAAAGTTTACGTTGATCAAtta > 2:237893/1‑248 (MQ=255) ggAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTg > 1:100827/1‑251 (MQ=255) aaaCGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATTGTCGGTTCCGGCCCGGCGGGGGCAGCGGCAGCAATTTTCTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGCtgt > 2:126615/1‑251 (MQ=255) aaaCGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGtt < 2:314495/246‑1 (MQ=255) aaaCGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGtt > 1:314495/1‑246 (MQ=255) cGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGCCGTATTAATCGTCGGTTACGGCCCGGCGGCACCAGGGGCAGCAATTTCCTCCGACCGTAAAGGCACCCGTCCCGGTCTGATGGGCGAACGATTTGGTGGTCGGATTCTAGATACCGTTGATATC‑GAAAACTACAtt > 1:402793/1‑174 (MQ=255) cGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGGCTGATGGGCGAACGTTTTGGTGGTCAGAGCCTAGATACCGTTTATATC‑GAAAACTACAtt < 2:402793/174‑1 (MQ=255) aagaGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCCATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTTATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACCGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACCGCCa > 1:132778/1‑250 (MQ=255) agCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAgc < 2:160592/251‑1 (MQ=255) agCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACGGAAAGTTGACGTGGAGTAATACGACGTTGATGTGATCGACAGCCAGAgc < 1:237893/251‑1 (MQ=255) gAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGcc < 2:366821/250‑1 (MQ=255) aCAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCCAACGTTTTGGGGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTAc > 2:349486/1‑162 (MQ=255) aCAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCAAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTAc < 1:349486/162‑1 (MQ=255) cAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGGGCAAAGGCAGCAATTTACTCCGCACGTAAAGGCATCCGGACCGGTCTGATGGGCGAACGATTTGGTGGTCAGAACCTAGATACCGTTGATATC‑GAAAAATACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCAAGATGATGAATAAGACGTTGATGTGATCGAAAGCCAGAGCGCCAGc > 1:398783/1‑250 (MQ=255) aaGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑aa < 2:89205/251‑1 (MQ=255) aaGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCCTACCGGTCTGATGGGCGAACGTTTTGGGGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAAAACGAAGGTGATGGGATCGACAGCCAGAGCGCCAGC‑a > 2:181986/1‑250 (MQ=255) aGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGGGGAGCCGGAGCGATTTACTCCCCGCGTAAAAGCATTCGTCCCGGTCTGCTGGGGGAACGCTTTGGTGGGCAGATCCCAGGTACCGTTGCTATCCGAAAA‑TACATTTCTGTACCGAAGACTGCAAGGCAGAAGCCGGCAGGGGCCCTGACAGTTCACGTTGATGAATACCACGTTGCTTTGAGCGAAAACCTAAGCGCCAGC‑aa > 2:331685/1‑250 (MQ=255) cGTATTAAGCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCcagcagcag < 1:77244/251‑1 (MQ=255) aTTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTAATCCGCCCGGAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCCCTGAAAGTTCACGTTGATGAATACGACGTTTATGGGATCGACAGCCAGAGCGCCCGC‑AAACTGATCCcagcagccggtg > 1:329664/1‑246 (MQ=255) tAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAAGGATCCGTACCGGGCTGGTGGGCGAACGGTTTGGGGGGCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGGAGACTGAAGGGCAGAAGCTGGCAGGCGCAATGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACCTATCCCAGCAGCAGTTGa > 2:78554/1‑250 (MQ=255) aaTCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGaa < 2:10956/250‑1 (MQ=255) tcgGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCa < 1:235472/211‑1 (MQ=255) ccggcccggcGGGTGCAGCGGCCGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGGGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTTAAAGTTCACGTTGATGAATACGACGTTTATGTGATCGACAGCCAGAGCGCCCGCCAAAC‑GATCCCCGCAGCAGTTGAAGGGGGTTTGCAt > 2:202899/1‑251 (MQ=255) ccggcccggcGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCAt < 1:117715/251‑1 (MQ=255) ccggcGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGAt < 2:100827/251‑1 (MQ=255) ggcggGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTg < 2:16714/251‑1 (MQ=255) gggTGCAGCGGCAGCAATTTACTCCGCACGTAACGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGaat > 2:380059/1‑250 (MQ=255) ggTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATTGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAAc > 1:301238/1‑251 (MQ=255) cGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCt < 1:351110/251‑1 (MQ=255) cagcaATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGgc > 1:199318/1‑251 (MQ=255) aaTTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCTAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTATGGCGCgg > 2:51078/1‑251 (MQ=255) ttACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTAc > 1:108331/1‑251 (MQ=255) ccGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATc > 2:240754/1‑191 (MQ=255) ccGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATc < 1:240754/191‑1 (MQ=255) cGTAAAGGCATCCGTACCGGTCTGATGGGCGCACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACg > 2:173301/1‑251 (MQ=255) cGTAAAGGCATCCGTACCGGTCCGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGAGCCCAGCAGCAGTTGAAGGGGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACg < 2:354230/251‑1 (MQ=255) ccGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATc < 2:389410/250‑1 (MQ=255) aCCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTgg < 1:187272/250‑1 (MQ=255) aCCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGc < 2:94689/251‑1 (MQ=255) aCCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGc < 1:72558/251‑1 (MQ=255) gTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGAcc < 2:91857/251‑1 (MQ=255) cTGATGGGCGAACGTTTTGGTGGTCAGATACTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCGCGCAGCATTATCGTGGCGACCgg > 1:116315/1‑251 (MQ=255) gATGGGCGAACGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCgg < 1:244309/249‑1 (MQ=255) aTGGGCGACCGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGc > 2:48890/1‑251 (MQ=255) cGTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGgcg > 1:410949/1‑251 (MQ=255) gTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACCTTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGgcgc > 1:34622/1‑251 (MQ=255) gTTTTGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGgcgc > 2:217637/1‑251 (MQ=255) tttGGTGGTCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGGCGCa > 1:309805/1‑250 (MQ=255) gtCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGGCGCAACATGAAc < 1:202899/251‑1 (MQ=255) gtCAGATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGACTGAAACAGCTTCTGGCGCGGTACGGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAGTGGCGCAACATGAAc < 2:199318/251‑1 (MQ=255) gATCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGGCGCAACATGAACGTTc < 1:169139/251‑1 (MQ=255) aTCCTAGATACCGTTGATATC‑GCAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGGCGCAACATGAAAGTTcc > 2:16802/1‑251 (MQ=255) tCCTAGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAACTGGCGCAACATGAACGTTCCg > 2:307724/1‑251 (MQ=255) | TGGGCGTTCCGGCAGTGTTCGTAAACGGGAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTCGATACCGTTGATATC‑GAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGC‑AAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGGCGCAACATGAACGTTCCG > NC_000913/640258‑640748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |