Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 343,442 G→A G187R (GGA→AGA)  yahK → aldehyde reductase, NADPH‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913343,4420GA81.8% 74.8 / 0.4 33G187R (GGA→AGA) yahKaldehyde reductase, NADPH‑dependent
Reads supporting (aligned to +/- strand):  ref base G (6/0);  new base A (5/22);  total (11/22)
Fisher's exact test for biased strand distribution p-value = 4.17e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATG  >  NC_000913/343198‑343667
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                    
ctactGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTgggggatt                                                                                                                                                                                                                                >  2:63084/1‑246 (MQ=255)
  actGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACata                                                                                                                                                                                                                                <  1:395031/249‑1 (MQ=255)
        aTCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGACATATGGGGaat                                                                                                                                                                                                                        >  1:149437/1‑249 (MQ=255)
                  ccgcgcttccgatctgCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGccc                                                                                                                                                                                                              <  2:57580/236‑1 (MQ=255)
                                 gCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGAGACATATGGGGGTTAAGCTGGccccgatcgggagagcac                                                                                                                                                                                               >  1:57580/1‑236 (MQ=255)
                                    gACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACAtg                                                                                                                                                                                            <  1:123153/251‑1 (MQ=255)
                                       gCCGGACGAACCGGGCCCTACTCTGGGCGGCTCCTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCCTGGACATCTTGGGGTTAAACCGGCCCACCCGAgggggggacctttgg                                                                                                                                                                                         >  1:144877/1‑242 (MQ=255)
                                       gCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATgtgg                                                                                                                                                                                         <  2:13522/251‑1 (MQ=255)
                                                aCCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTa                                                                                                                                                                               <  2:127884/251‑1 (MQ=255)
                                                    ggCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGAGACATATTGGGGTTTAGCCGGGCCCCGCGAGGGGGGCACATTTGGTGGGAttttcccc                                                                                                                                                                            >  1:68154/1‑246 (MQ=255)
                                                               gggCGGCTACTCACAACAGTTCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCGGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGGCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCaa                                                                                                                                                               <  2:239488/251‑1 (MQ=255)
                                                                                 gATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAg                                                                                                                                             <  1:117310/251‑1 (MQ=255)
                                                                                               aGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTTGGGCCTATTGGGGTTAAACTGGCCCACGCCATGGGGGCACATGTGGTGGCATTTTACCCTTCTGAGGCAAAACGCGATGCGGCAAAAGACCCTggggccggt                                                                                                                               >  1:135738/1‑246 (MQ=255)
                                                                                                   atatGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAg                                                                                                                          <  2:185919/251‑1 (MQ=255)
                                                                                                            gCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTaa                                                                                                                   <  2:149415/249‑1 (MQ=255)
                                                                                                               tATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGGGACATATGGGGGTTAAGCTGGCCCCCCCGGTGGGGGGGCATGTGGGGGCATTTTCCACATTTTTGGCAAAAAACGAAGCGGCAAAAACCCCggggggccgtgaaggttgtaaatcac                                                                                                              >  2:175212/1‑230 (MQ=255)
                                                                                                                aTTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCAc                                                                                                              <  2:226671/250‑1 (MQ=255)
                                                                                                                aTTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCAc                                                                                                              <  1:67611/250‑1 (MQ=255)
                                                                                                                                     cTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGGTTAAGCCGGCCCCCGCGGTGGGGGGAAATGTGGGGGGATTTACCCCTTTTGAGGCAAAACGCGAAGCGGCAAAAACCCTGGGGGGCGGTGAAGGTGTTTACTCCCGCAAAGCCGGTGAGATggcggg                                                                                        >  1:268762/1‑250 (MQ=255)
                                                                                                                                         cggcggTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGGGGTGGCAGTTACCACTGCTGAGGCAAAACGCGAAGCGGCAAAAGCCCGGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCAt                                                                                    <  1:232732/251‑1 (MQ=255)
                                                                                                                                          ggcggTGGCTCCTTTGTTGTGTGCAGGGATCACCCCGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATc                                                                                   <  2:408726/251‑1 (MQ=255)
                                                                                                                                              gTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGaa                                                                               <  2:22357/251‑1 (MQ=255)
                                                                                                                                                ggcgccTTTGTTGTGGGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAaga                                                                             <  2:119376/247‑1 (MQ=255)
                                                                                                                                                           tgtgtgCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGAttt                                                                   <  1:59618/250‑1 (MQ=255)
                                                                                                                                                                gCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCAtttt                                                             <  1:343808/251‑1 (MQ=255)
                                                                                                                                                                 cAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTg                                                            <  1:253193/251‑1 (MQ=255)
                                                                                                                                                                     gATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATa                                                        <  1:63084/251‑1 (MQ=255)
                                                                                                                                                                       tCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGGCTGAGACATATGGGGGGTAAGCTGGCCCACGCGATGGGGGCAAATGTGGGGGGATTTACCAATTCTGGGGCAAAAAGCGAAGCGGCAAAAGCCCTGGGGGCCGATGGAGGTGTTAACTCACGCAAAGCCGATGGGATGGCGGCTCATCTGAAAAGTTTTGGTTTCATTTTGAATAc                                                       >  1:366600/1‑250 (MQ=255)
                                                                                                                                                                           cacGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAg                                                  <  1:370536/251‑1 (MQ=255)
                                                                                                                                                                               tATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCCGGCCCCCCCGATGGGGGCACATGGGGTGGCATTTACCACTTCTGAGGCAAAAAGCGAAGCGGCAAAAAACCTGGGGGCCGATGAAATTGTTAACTCACACAATGCCCATGAGAAGGCGGCTCATCTGCAAAGGTTCTATTTTATTTTGAATACAGTAGCTgc                                              >  1:17965/1‑251 (MQ=255)
                                                                                                                                                                                      cgcTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGAAATATGGGGGTTAAGCTGGGCCACGCGATGGGGGCGCATGTGGTGGCCTTTACCCCTTCTGTGGCACAAACCCAAGCGGCAAAAACCCCGGGGGGCGGTGAAGGTGTTAAATCCCGCAATGCCGATGAGATGGGGGCTCCTCTTAAGAGTTTTTATTTTCTTTTGAATACACGAGCTGCGCCCCAt                                       >  2:186632/1‑251 (MQ=255)
                                                                                                                                                                                               aCTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGGTTAAGCTGGGCCCCGCGGTGGGGGCACATGTGGGGGGATTTACCACTTCTTAGGGAAAAAGCGAAACGGCAAAAACCCCGGGGGGCGATGGAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGGTTTGCTTTTATTTTGAATACAGTAGCTGCGCCACATAATCTcgac                              >  1:151744/1‑251 (MQ=255)
                                                                                                                                                                                                        ccgggccgggTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTacc                     <  1:175212/251‑1 (MQ=255)
                                                                                                                                                                                                                           gggCGTGGTCGGCATCGGCGGTCTGAGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATg  <  2:396291/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                    
CTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATG  >  NC_000913/343198‑343667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: