| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,177,748 | 0 | C | A | 30.4% | 88.7 / 21.3 | 69 | E55* (GAG→TAG) | nudF | ADP‑sugar pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (31/17); new base A (0/21); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.19e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGGTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCC‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAATTGAG > NC_000913/3177499‑3177996 | gggTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTGGGTCC‑GTTTGATT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCTCACTTTCACCCTCTTCAATCATCCCGGCAACCAGCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTc < 1:400290/249‑1 (MQ=255) cccGGGCTGGCCAGAAAACTTACCCCCGGTTTGGCCC‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTc < 1:138699/251‑1 (MQ=255) gtccgcttccgatcttgttacccccGGTTTGTTCC‑GTTT‑ACTTATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAGCTTCA‑TCACGCACTGGGT‑CAAATGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTcc < 1:368600/227‑1 (MQ=255) gggCTTGCCAGGCAACTTAACACCGGTTTGGTCC‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCaaaaa > 2:191562/1‑244 (MQ=255) ggcgtgcccagaaagttaaaCACCGGTGTGGCCC‑GTTTAACT‑ACCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTGCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCaaaaa < 1:191562/226‑1 (MQ=255) gtcTTGCCAGGAAACTTAACCGCGGTTTG‑TCCTGTTTGACT‑ACCGGCCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCGGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCccgc < 2:336590/249‑1 (MQ=255) gCCAGGAAACTTAACACCGGTTTGGTCC‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCAc > 1:147827/1‑251 (MQ=255) aGGAAACTTAACACCGGTTTGGTCC‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGCCGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTc > 1:365150/1‑251 (MQ=255) aaaCTTAACACCGGTTTGGTCC‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATg > 2:115365/1‑251 (MQ=255) aCTTAACACCGGTTTGGTCC‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTcc > 2:368600/1‑235 (MQ=255) ggTTTGGTCC‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAACATTTCCCGCCGCACCTCATGACTCATTTGccc > 2:340465/1‑251 (MQ=255) gttgggtccttttgaacatctgttCCCCCCTCTTCAATC‑CTTGCGCGCCGGGCACCACCTCCCACTCTTTCCCCCTCTTCAATAACCCCGGCAACCATCTCCATGAGCCAGGGGTTTT‑CTCGGGTTTCGTCCGCGGAAATCCGAAT‑CTGCTCAATCAGCCCAACTTCA‑TCACACACTGGTT‑CAAAGGGTGGCAAGACGGGGTTGTGACCTCGTGCAAAAATTTCCCGCCGCACCTCATGACTCATTTGccc < 1:173723/228‑1 (MQ=255) tcttttctatccccccccccGCCTCTTCAAGCGCTT‑CGCGACGGGCAACATCTCCCCCCCTTCCCCCCTCTTCAATCCCCCCGGCAACCATCCCCAGTAGCCAGGGGTTTT‑CGCTGGTGTCGTCCGGGGAAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACCCACTGGGT‑AAAGGGGGAGCAAGCCTGCGGCGTGCCCGCGTTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGaa < 2:70599/233‑1 (MQ=255) c‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAAt > 2:11318/1‑249 (MQ=255) gTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTACACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCACTCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAAt > 2:358605/1‑248 (MQ=255) taacctcccaccccctcccttccAATCGCTC‑CGCGGCGGCCAACATCTTCCACACTTTCCCCCTCTCAAACCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGAAACCCGAAT‑CTGCCAAATCACCCAAACTTCA‑TCCCGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGCCCGCGTAAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGAc < 2:76146/228‑1 (MQ=255) catacccccccccGCCTCTTCAATCGCTC‑CGCGACGGGCAACATCTCCCACACTTCCCCCCTCTTCAACCACCCCGGCAACCACCCCCAGTACCCAGGGGGTTT‑CGCGGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCCCGCAGTGGGT‑CAAGGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCGCCTCATGACTCATGTGCCGGTTGAAGAGACGAt < 1:115365/241‑1 (MQ=255) t‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCACCCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGAc > 2:205934/1‑251 (MQ=255) ccaagccccGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCCCCCTCTTCAATCACCCCGGCAACCATCCCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAACCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACGGGGT‑CAAAGGGTAGCAAGACGGCGGCGTGACCGCGCTAAAAAATTGCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACg < 1:372880/245‑1 (MQ=255) ccccccccccTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACCCTTTCCCCCCCTTCAATCACCCCGGCAACCACCCCCAGTAGCCAGGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑CCCCGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACg < 1:197382/241‑1 (MQ=255) aagccccGCCTCTTCAATCGCTC‑CGCGACGGGCAACATCTTCCCCACTTTCCCCCCCTTCAATCACCCCGGCAACCACCCCCAGTAGCAAGGGGGTTT‑CGCGGGTGTCGTACGCGGCAATCCAAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑AAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGaa < 1:219612/247‑1 (MQ=255) gTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAAt > 1:113281/1‑251 (MQ=255) ccGCCTCTTCATCCCCTT‑CGCGCCGGCCAACATCTTCCCCCCTTCCCCCCTCTTCAAACACCCCGGCACCCATCCCCAGTAGCCAGGGGTTTT‑CGCTGGTGTCGTACGCGGCAATCCGATT‑CTGCACAATCACCACAACTTCA‑‑CCCCCCCAGGGTTCAAAGGGTACCAAGCCTGCGGCGTGACCCCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCta < 2:92354/251‑1 (MQ=255) ccccctTCAACCGCTC‑CGCGCCGGGAAACTACTTCCCCCCTTTCCCCCTCTTCATACATCCCGGCAACCAACCCCAGTAGCCAAGGGGTTC‑CGTGGGGGTCGAACGCGGCAATCCGAAT‑CTGCCCAACCAGCAAACCTTCA‑TCCCGCACGGGGC‑CAAAGGTTAGAAAGACGGCGGCGTGACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCtata < 1:332175/247‑1 (MQ=255) cctctaaaaTCGCTT‑CGGGACGGGCAACATCTTCCACACTTTCCCCCTCCTAAATCACCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCGGGGGTCGTCCGCGGCAACCCGAAT‑CTGCCCAATCAGCACAACTTAA‑TCACGCACGGGGT‑AAAAGGGTAGCAAGACGGCGGGGTGCCCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATaa < 1:233487/244‑1 (MQ=255) cctcgtcaagccctgcgcgCCGGGAAACATCTTCCCCACTTGCACCCGCTTAAACCCCCCCGGCACCAATCCCCAGTAGCAAAGGGGTTG‑CGCTGGGGTCGTCGGCGG‑AAACCGGATGCTGCCAAATCACCACAACTTCA‑TCACGCCCGGGGT‑CAAGGGGTAGCAAGCCTGCGGCGTGCCCGCGCTAAAAAATTCCCCGCCGCACCTCATGACTCAGTTGCCCGTTGAATAGACGATGACGAAATCTATaa < 2:110763/236‑1 (MQ=255) ctTCAATCGCTT‑CGCGACGGGAAACATCTTCCACAATTTCACCCTCTTCCATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCACTCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAACGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTGTaaat > 2:411317/1‑249 (MQ=255) acAATCGCTC‑CGCGCCGGGCAACATCTCCCACACTTCCCCCCTCTTCAATCACCCCGGCACCCATCCCCAGTAGCAAAGGGGTTT‑CGCTGGTGTCGTCCGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGTT‑CAAAGGGTAGCAAGACTGCGGCGTGCCCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGagc < 2:42592/250‑3 (MQ=255) cAATCGCTT‑CGCGACGGGCAACATCTTCCCCACTTTCCCCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACACCTTCA‑TCCCGCCCGGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCTCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATc < 1:342130/250‑1 (MQ=255) aTCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTa > 1:175939/1‑250 (MQ=255) cgt‑CGCGGCGGGAACCATCTACCACACTTCCCCCCTCTCCAATCAGCCCGGCAACCACCTCCAGTGCCCAGGGGGTTT‑CGCTGGTGTCGTGCGCGGCAATCCAAAT‑CTGCTCAATCAGCACACCTTCA‑CCCCGCGCGGGGT‑TAAAGGGTAGCAGGACTCGGGTGTGACCGTGCTCAAAAATTTCCCGCCGCACCTCATGACGCATTTGCCCTTTGAAGAGACGATGACGAAATCTATAAAGATCTAATGaa < 1:409317/249‑1 (MQ=255) cgcgACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGCGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGaaaa > 1:190144/1‑250 (MQ=255) cggcGGGCAACATCTCCCACACTGTCCCCCTCTTCAATCATCCCGGCAACCAACCCCATTAGCCAAGGGGTTG‑CGCTGGTGCCGTCCGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑CCACGCACGGGGT‑CAAAGGGTGGCAAGACTGCGGCGTGACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGaaaaaaa < 2:9805/248‑1 (MQ=255) aCATCTCCCCCACTTCCCCCCTCTTCAATCACCCCGGCACCCACCTCCAGTAGCCAGGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTCCA‑TCCCGCACGGGGT‑CAAAGGGTAGAAAGACTGCGGCTTGACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATa < 2:147827/251‑1 (MQ=255) tCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAgtgt > 1:99740/1‑251 (MQ=255) ccacTTTCCCCCTCTACAACCCCCCCGGCACCCACCCCCATTGGCCA‑GGGGTTTGCGGTGGTGGCGTACGCGGAAACCCGAAT‑CTGCCCAATAAGCA‑AAATTCAACCACGCA‑TGGGTTCAAAGGGTAGCAAGCAGGGGGCGTGCCCGCGCTAAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTtc < 2:294936/250‑1 (MQ=255) tttCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGt > 2:171795/1‑251 (MQ=255) ttCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTg > 2:138237/1‑251 (MQ=255) ccTCTACAATCATCCCGCCACCCATCTCCAGTAGCAAAGGGGTTT‑CGCTGGTGTCGGACGCGGCAATCCGAAT‑CTGCTCAATCAGACCAACTTCA‑TCCCGCACTGGGT‑AAAAGGGTAGCAAGCCTGCGGCGTGACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCaata < 1:112200/251‑1 (MQ=255) ctTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAAtt > 2:187465/1‑251 (MQ=255) tcaaccacccaggCAACCACCTCCAGTAGC‑AAGGGGTTTTCGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTGCA‑TCACGCACTGGGT‑AAAAGGGTAGAAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAAttt < 1:6313/239‑1 (MQ=255) cccGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGt > 1:184032/1‑251 (MQ=255) caaccaacCCCATTAGCCAAGGGGTTT‑CGCTGTGGTCTTACGCGGAAATCAGAAT‑CTGCACAATCACCACAACTTCA‑TCACGCTGGGGGT‑CAAGGGGTAGCAAAACTGCGGCGTGACCGCGCTCAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGgtttgg < 2:149219/251‑3 (MQ=255) cccAGGAGCCAGGGGTTTT‑CGGGGGTGTCGTACGCGACAACCCGAAT‑CTGCTCAATCACCACAACTTCA‑TCACGCAGGGGGA‑AAAAGGGAAGCAAGACGGCGGCGTGCCCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGt < 2:393906/250‑1 (MQ=255) cAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTa > 2:44971/1‑250 (MQ=255) tAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAACAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACgg > 2:27874/1‑251 (MQ=255) ccagtggtttt‑CTCTGGTGTCGTCCCCGAAAATCCGATT‑CTGCTCAATCAGCACAACTCCA‑CCCCGCACGGGGT‑AAAAGAGTAGAAAACCTGCGGCTTGACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCa < 1:358605/243‑1 (MQ=255) cAAGGGTTTT‑CGCTGGTGTCGTCCGCGCCAACCCAAAT‑CTGCTCAATCAGCACACCTTCA‑TCACGCCCTGGTT‑CAAAGGGTAGCAAGACTGCGGCGTTACCGCGCTCAAAAATTCCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATGTCTACATCGTTTTTGCCAAATGTAACGGGCAg < 1:357581/251‑1 (MQ=255) ttt‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATg < 1:39666/174‑1 (MQ=255) ttt‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATg > 2:39666/1‑174 (MQ=255) tt‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGAt > 1:80312/1‑167 (MQ=255) tt‑CGCTGGGGTCGTACGCGGCAATCCGAAT‑CTGCTCAAGCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGCCCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGAt < 2:80312/167‑1 (MQ=255) cGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGc > 2:45095/1‑251 (MQ=255) gtCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCCTTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGc > 1:33647/1‑250 (MQ=255) cGTACGCGGCAATCCGAAT‑CTGCTAAATCAGCACAACTTCA‑TCACGCACGGGGT‑AAAGGGGTAGCAAGACTGCGGCGTGCCCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCAtt < 1:215503/251‑1 (MQ=255) tACGCGGCAATCCGAAT‑CTGCTCAATCAGCACATCTTCA‑TCCCGCACTGTGT‑AAAGGGGTAGCAAGACTGCGGCGTACCCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCAt < 1:83801/248‑1 (MQ=255) gccAATCCGAAT‑CGGCTAAATCAGCAAAACTTCA‑CCCCGCACTGGGT‑CAAGGGGTAACAAGACTGGGGCGTGCCCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAAtt < 2:370173/249‑2 (MQ=255) cAATCCGAAT‑CTGCTCAAACAGCACACCTTCA‑TCGCCCACGGGGA‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCACAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTc < 2:55295/251‑1 (MQ=255) aTCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCt > 2:286362/1‑251 (MQ=255) aTCCGAAT‑CTGATCAACCAGCACAACTTCC‑CCCCGCACGGGGT‑CAAAGGGTAGCAAGCCTGCGGCGTGCCCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCt < 2:333555/251‑1 (MQ=255) aaT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCAc > 2:83546/1‑251 (MQ=255) aTCAGCACAACTTCA‑CCACGCACTGGGA‑CAAAGGATAGCAAGACTGCGTCGTGCCCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAGTCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGaa < 1:11318/251‑1 (MQ=255) a‑tcaCGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGGGCCCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAAttt < 1:187465/251‑1 (MQ=255) caCGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTAAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCa < 1:44971/251‑1 (MQ=255) caggggT‑AAAAGGGTAGCAAGCCTGCGGCGTACCCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATATCAGCGAc < 2:338598/248‑1 (MQ=255) aCTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGAc > 1:82910/1‑251 (MQ=255) gCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTg > 2:174823/1‑251 (MQ=255) gACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGCTCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGtt > 2:200967/1‑250 (MQ=255) aCCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTa > 2:327729/1‑250 (MQ=255) gcTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAATTg > 1:216173/1‑250 (MQ=255) cAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAATTGAg < 1:71191/249‑1 (MQ=255) | TGGTGCCCCCCGGGCTTGCCAGGAAACTTAACACCGGTTTGGTCC‑GTTTGACT‑ATCAGTCCCGCCTCTTCAATCGCTT‑CGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTT‑CGCTGGTGTCGTACGCGGCAATCCGAAT‑CTGCTCAATCAGCACAACTTCA‑TCACGCACTGGGT‑CAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTGCCCGTTGAATAGACGATGACGAAATCTATAAAGATCTAATGAAAAAAAGCCGCGATAAAGTGTTTCTCGTGCAATAATTTCTACATCGTTTTTGCCAAATGTAACGGGCAGGTTGTCTGGCTTAAGCATTGTTAATGTCCTGGCACTAATAGTGAATTAAATGTGAATTTCAGCGACGTTTGACTGCCGTTTGAGCAGTCATGTGTTAAATTGAG > NC_000913/3177499‑3177996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |