Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 2170381–2171426 | 2175000 | 3575–4620 | 5 [4] | [0] 24 | [insE5]–[gatA] | [insE5],insF5,gatR,gatD,gatB,[gatA] |
ATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCATCTCATTACCGATATGGGTTAAAACTTCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCAAGATTCACCATCATCGTTTCGACGCTATTTTTAATC > NC_000913/2174764‑2175251 | acaactggcgcagtaaacagcaaaatcagcagacgtcttctgaacgtgaactggagatgtctaccgagattgcacgtctcaaacgccagctggcagaacgggatgaagagctggctatcctccaaaaggccgcgacatacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGAc > 1:104945‑M2/238‑250 (MQ=255) ctggcgcagtaaacagcaaaatcagcagacgtcttctgaacgtgaactggagatgtctaccgagattgcacgtctcaaacgccagctggcagaacgggatgaagagctggctatcctccaaaaggccgcgacatacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACaaa > 1:210287‑M2/234‑249 (MQ=255) cagacgtcttctgaacgtgatctggagatgtctaccgagattgcacgtctcaaacgccagctggcagaacgggatgaagagctggctatcctccaaaaggccgcgacatacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGtt < 1:357836‑M2/43‑1 (MQ=255) ggagatgtctaccgagattgcacgtgtcaaacgccagctggcagaacgggatgaagagcgggctatcctccaaaaggccgcgacagacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagtgcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAGCAGGTTAGTCAGATACCGTCCTGATTcc < 2:207016‑M2/65‑1 (MQ=255) tgtctaccgagattgcacgtctcaaacgccagctggcagaacgggatgaagagctggctatcctccaaaaggccgcgacatacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGcac > 2:19446‑M2/181‑249 (MQ=255) caaacgccagctggcagaacgggatgaagagctggctatcctccaaaaggccgcgacatacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCa < 2:211352‑M2/90‑1 (MQ=255) ccagctggcagaacgggatgaagagctggctatcctccaaaaggccgcgacatacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAAcatcat < 1:183007‑M2/99‑1 (MQ=255) ggctagcctccaaaaggccgcgacatacttcgcgaagagcctgaaatgaagtagggctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTGATCCATAATCAGCTGATg < 2:392775‑M2/124‑1 (MQ=255) caaaaggccgcgacatacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatccggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAACCATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTg > 1:37514‑M2/116‑250 (MQ=255) gcgacatacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTcccc < 1:41547‑M2/145‑1 (MQ=255) gcgacatacttcgcgaagcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTcccc < 1:103411‑M2/145‑1 (MQ=255) agcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGAt < 1:305448‑M2/137‑1 (MQ=255) agcgcctgaaatgaagtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGAt > 2:305448‑M2/91‑227 (MQ=255) agtatgtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAg < 2:22506‑M2/175‑1 (MQ=255) gtctttattgaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACt < 2:121415‑M2/180‑1 (MQ=255) gaaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATc > 1:159402‑M2/63‑250 (MQ=255) aaaaacatcaggctgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCACGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATCAt > 2:117214‑M2/62‑251 (MQ=255) tgagttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATg > 1:361339‑M2/49‑251 (MQ=255) agttcagcatcaaagcaatgtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTc > 2:99633‑M2/47‑251 (MQ=255) gtgccgcgtgctccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTCGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCATCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCAAGATTCAcc < 1:97316‑M2/224‑1 (MQ=255) gcgtgctccgggtggcccgcagCTCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATAGTCCGTCCTTAGTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGGTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGCCCACGCCTTCAAGCTTCAGcatcat < 2:62958‑M2/229‑1 (MQ=255) ccgggtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCAAGATTCACCATCATCGttt < 2:13715‑M2/234‑1 (MQ=255) gtggcccgcagCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCAAGATTCACCATCATCGTTTCGACGc > 1:356535‑M2/12‑251 (MQ=255) cGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGTGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCAAGATTCACCATCATCGTTTCGACGCTATTTTTAATc > 2:284995/1‑251 (MQ=255) | ATACCGCCACGTCGTTATCATCATCCGCTTGCTGAAAATGAACTTTATTTGTTGGCCTTAACAGATAAATGGCTGACGACTTAGCATGAATCGCCTCACAATGCGGTATTGCAATAGCGTGCTGCTCAAGCATTATCCCGGTAGGGAATTCTGCTTCTCTGGCAATTAATGCCTGTGGCCAGGTATCATGAACCACACCTTTGGCGAGCATCTCATTACCGATATGGGTTAAAACTTCGCTACGATCGACAAAAGAAATTCCGCTACGAACAAACAGGTTAGTCATATACCGTCCTTATTCCGCACAGCCGTAGCGATAGGCGCGCAAAACATCATAAATTTTATCCATAATCAGCTGATGCGGTATTGCTGATAATTCCCCGGACTGAATGCGTTCAAATTGTTTGGGAAGATACTGACTAATCATGCCCAGTGGGATGTCCACGCCTTCAAGATTCACCATCATCGTTTCGACGCTATTTTTAATC > NC_000913/2174764‑2175251 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |