| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,102,944 | Δ1,424 bp | IS5‑mediated | [wbbL]–[wbbK] | [wbbL], [wbbK] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2101983–2102948 | 2104367 | 1420–2385 | 5 [4] | [0] 18 | [insH7]–[wbbK] | [insH7],wbbL,[wbbK] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2104368 = | 0 (0.000) | 18 (0.450) | 17/482 | 1.1 | 100% | coding (142/1119 nt) | wbbK | putative glycosyltransferase WbbK |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
TTTCACGGAATAAAATTCCTTTATAAAAAGGTGCAGGGTTATGACAATACACATATCTTTTTTTAGTGACGACATTGGCCGTAATATCATGCAGACAAATCCAATGCGTAGCATTCAGCTCTTTTGAAAGTTTTTTACAAACTACATATTCAAAGTGCAAACGTTTTAGCCACGACCCTTTAACCTCAGGAAACTCAATGAATTTAACCCATGGATAACTTTCTTTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTTGCTGCCAAAAATTTTTTCAAAATGGTAAATGGACCGCCAGTGGTAAAATTGACCGCAGAAACAACGACTATGCTTTTTCCCATAATTTGGTCTCATGATTGTATTTCTTTATGATTTTTGCTGGTACTCCCGCAATGACAGTATTTTCGGGAATAGAACCTCTAACAACAGAATTGGCGCCGACTACGACT > NC_000913/2104143‑2104617 | gccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAAt > 1:91270‑M1/226‑251 (MQ=255) cggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGc > 2:296743‑M1/224‑251 (MQ=255) ggccattaccagccttggggtaaaacgtctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgagctcatatcagggacttgttcgcaccttccGTAACTCTTTAGCAGAATGGCCTAATGCg > 2:260402‑M1/223‑251 (MQ=255) ccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGAc < 2:328370‑M1/40‑1 (MQ=255) aaacggctcgacgacttccacaatgttttgccatggcagaatctgctccatgcgggaaaagacaatctcttttctggtctgccggcgcttactgctgacttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTttat < 2:275731‑M1/51‑1 (MQ=255) aacggctcgatggcttccacaatgttttgtcctggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaatttactgtcggcgaaggtaagttgatgactcctgatgaaccctgttctatggctccagatgacaaaaatgatctcatatcaggggcttgttcgcaccttccTTAACTCTTTTGCAGAATGGACTAATGCGATaaa < 2:28778‑M1/34‑1 (MQ=255) aacggctcgatgacttccacaatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATaaa > 1:28778‑M1/200‑233 (MQ=255) tgacttccaccatgttttgccatggcagaatctgctccacgcgcgacaagaaaatctcttttctggtctgacggcgcttacggccgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttatatggctcaagatgaaaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTtgct < 1:260462‑M1/62‑1 (MQ=255) gttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTTGCTGCCAAAAAtttt > 1:339653‑M1/177‑250 (MQ=255) ccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTTGCGGCCAAAAATTTTTTCAAAATGGTAAATGGACCGcc > 1:328370‑M1/154‑250 (MQ=255) ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTTGCTGCCAAAAATTTTTTCAAAATGGTAAATGGACCGCCAGTGGTa < 1:120227‑M1/104‑1 (MQ=255) aaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaggggaagttgatgactcatgatgaaccctgttctatggctcaagatgacaaacatgatcacatatcagggactttttcgcaccttccTTAACTTTTTAGCAGAATTAACTAATGCGATAAAACTGTCATTTTCTTTATTATTAGTTGTTGCCAAAAATTTTTTCAAAATGGTAAATGGACCGCCAGTGGTAAAattgcac > 1:221553‑M1/139‑248 (MQ=255) ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTtgct > 1:70604‑M1/118‑179 (MQ=255) ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTtgct < 2:70604‑M1/62‑1 (MQ=255) taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTTGCTGCCAAAAATTTTTTCAAAATGGTAAATGGACCGCCAGTGGTAAAATTGACCGCAGAAACAACGACTATGCTTTTTCCCATAATTTGGTCTCATGATTGTATTTCt < 2:364809‑M1/167‑1 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTTGCTGCCAAAAATTTTTTCAAAATGGTAAATGGACCGCCAGTGGTAAAATTGACCGCAGAAACAACGACTATGCTTTTTCCCATAATTTGGTCTCATGATTGTATTTCTTTATGATTTTTGCTGGTACTCCCGc < 1:35141‑M1/192‑1 (MQ=255) gcaccttccTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTTGCTGCCAAAAATTTTTTCAAAATGGTAAATGGACCGCCAGTGGTAAAATTGACCGCAGAAACAACGACTATGCTTTTTCCCATAATTTGGTCTCATGATTGTATTTCTTTATGATTTTTGCTGGTACTCCCGCAATGACAGTATTTTCGGGAATAGAACCTCTAACAACAGAATTGGCGCCg < 2:412508‑M1/241‑1 (MQ=255) cTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTTGCTGCCAAAAATTTTTTCAAAATGGTAAATGGACCGCCAGTGGTAAAATTGACCGCAGAAACAACGACTATGCTTTTTCCCATAATTTGGTCTCATGATTGTATTTCTTTATGATTTTTGCTGGTACTCCCGCAATGACAGTATTTTCGGGAATAGAACCTCTAACAACAGAATTGGCGCCGACTACGACt < 1:74660‑M1/250‑1 (MQ=255) | TTTCACGGAATAAAATTCCTTTATAAAAAGGTGCAGGGTTATGACAATACACATATCTTTTTTTAGTGACGACATTGGCCGTAATATCATGCAGACAAATCCAATGCGTAGCATTCAGCTCTTTTGAAAGTTTTTTACAAACTACATATTCAAAGTGCAAACGTTTTAGCCACGACCCTTTAACCTCAGGAAACTCAATGAATTTAACCCATGGATAACTTTCTTTTAACTCTTTAGCAGAATGGACTAATGCGATAAAACTGACATTTTCTTTATTATTAGTTGCTGCCAAAAATTTTTTCAAAATGGTAAATGGACCGCCAGTGGTAAAATTGACCGCAGAAACAACGACTATGCTTTTTCCCATAATTTGGTCTCATGATTGTATTTCTTTATGATTTTTGCTGGTACTCCCGCAATGACAGTATTTTCGGGAATAGAACCTCTAACAACAGAATTGGCGCCGACTACGACT > NC_000913/2104143‑2104617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |