Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 920,904 C→T I186I (ATC→ATT macB → ABC‑type tripartite efflux pump ATP binding/membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913920,9040CT100.0% 65.8 / NA 22I186I (ATC→ATTmacBABC‑type tripartite efflux pump ATP binding/membrane subunit
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (14/8);  total (14/8)

GTTGAAGTACCCGCCGTCTATGCTGGTCTTGAGCGGAAACAGCGACTGCTTCGTGCCCAGGAGTTGCTGCAACGGCTGGGGCTGGAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATCCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGATGGCATGGCGGGCGCTGG  >  NC_000913/920665‑921142
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                               
gTTGAAGTACCCGCCGTCTATGCTGGTCTTGAGCGGAAACAGCGACTGCTTCGTGCCCAGGAGTTGCTGCAACGGCTGGGGCTGGAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGAGATTCTGCATCAGcc                                                                                                                                                                                                                                      >  2:178231/1‑250 (MQ=255)
   gAAGTACCCGCCGTCTATGCTGGTCTTGAGCGGAAACAGCGACTGCTTCGTGCCCTGGAGTTGCTGCAACGGCTGGGGCTGGAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTgcg                                                                                                                                                                                                                                   <  1:149509/251‑1 (MQ=255)
                tCTATGCTGGTCTTGAGCGGAAACAGCGACTGCTTCGTGCCCAGGAGTTGCTGCAACGGCTGGGGCTGGAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGCCAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTg                                                                                                                                                                                                                                     >  2:211213/1‑236 (MQ=255)
                tCTATGCTGGTCTTGAGCGGAAACAGCGACTGCTTCGTGCCCAGGAGTTGCTGCAACGGCTGGGGCTGGAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTg                                                                                                                                                                                                                                     <  1:211213/236‑1 (MQ=255)
                   aTGCTGGTCTTGAGCGGAAACAGCGACTGCTTCGTGCCCAGGAGTTGCTGCAACGGCTGGGGCTGGAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACg                                                                                                                                                                                                                   >  2:155011/1‑251 (MQ=255)
                                          cGACTGCTTAGTGCCCAGGAGATGCTGCAACGGCTGGGGCTGGCAGCCCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCACCCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCACCAGCGCGATCGTGGGCATACGTTGATGATCGTCAcacccgagcc                                                                                                                                                                                            >  2:89506/1‑242 (MQ=255)
                                                                             ggggctggAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAGGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGaa                                                                                                                                                          >  1:99500/1‑250 (MQ=255)
                                                                                              cAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGAACCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAAtt                                                                                                                                        >  2:92522/1‑251 (MQ=255)
                                                                                                             cacaGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTccc                                                                                                                         <  1:66425/251‑1 (MQ=255)
                                                                                                                       gggTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGaa                                                                                                                >  2:217994/1‑250 (MQ=255)
                                                                                                                             tCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGACCGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTg                                                                                                          >  1:222150/1‑250 (MQ=255)
                                                                                                                                   aCAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGtt                                                                                                    >  2:1888/1‑250 (MQ=255)
                                                                                                                                           cacgcagcgcgggggcatgattgaAGGGTGGTAAGGTATTTCTTGCCGAGGACCAACCGGGCGCCCGGGACACCCATTCGGGCGAAGGGGTGATGGCGTTTCTACATCAGCGGCGCGGTGGTGGGCATACGGTGATTATCGCCCCCCCCGATCCGCAGGTCGCTGCTCGGGCCGAGCGGGTGATCGAAATTCGCGCGGGCGAATTTGGGCGCAATCCCCCCGCCATTGAAAAAGTGAATGTTACTGGCggg                                                                                           <  2:173101/230‑1 (MQ=255)
                                                                                                                                            cAGCTTCGCGCGGGCATTGATGAACGGTGGTCATGAAATTCTTGCCGGTAAACCACCCGGCGCCCGGGACAGCCATTCTGGCAAAGAGGTGATGGCGATTCTGCATCAGCGGCGGGATCGTGGGCATACGGTGATTACCGTCCCCCACGATCCGCAGGTCGCTGCGCAGGCGGGGGGGGTGATCAAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGa                                                                                          <  1:235740/251‑1 (MQ=255)
                                                                                                                                             aGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGAc                                                                                         >  1:174852/1‑251 (MQ=255)
                                                                                                                                              gcatggggcgGGCATTGATGAACGGGGGTCGGGTAATTCTTGCCGATGAACCACCCGGCGCACTGGACAGCAATTCTGGGGAAGGGGGGATGGCGTTTCTGCATCAGCGGCGCGATGGGGGGCTGAGGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGGGGGTGATCGAAATTCGCGAGGGCGAAATTGGGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACg                                                                                        <  2:148552/244‑1 (MQ=255)
                                                                                                                                                         gCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtgttgt                                                                             >  1:161369/1‑251 (MQ=255)
                                                                                                                                                               atgaGCGGTGGCTAGGAAATTCTTGCAGATGAACCACCCGGCGCACTGGACAGCCTTTCTGGCGAAGAGGTGATGGCGATTCTGCATCACCGGCGCGATCGTGGGCAGCCGGAGATTATCGTCCCCCGCGATCCGCAGGTCTCTTCTCGGGCCGATCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCCCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAacac                                                                       <  1:162944/251‑1 (MQ=255)
                                                                                                                                                                                    ttggCCGGTGACCCACCCGGCGCCCTGGACAGCCATTCGGGCGAAGAGGTGATGCCTTTTCTGCATCAGCGGCGCGTGCGGGGGCATGCGGTGATTATCGTCCCCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGGGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGt                                                  <  2:34496/247‑1 (MQ=255)
                                                                                                                                                                                                   accGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGGCGGAAACTGTTGTCAAAACCGGGTCTGGGTTGCGGCATGTTTGCAGCGGttttt                                   >  2:106523/1‑249 (MQ=255)
                                                                                                                                                                                                                gACAGCCATTCTGGCGAAGAGGTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGCAACTGTTGTCAACACCGTGCCTGGCTGGCGGCAGTTTGTCAGCGGTTTTTACGAGGCGCTGAc                      >  2:117109/1‑251 (MQ=255)
                                                                                                                                                                                                                                    ggTGATGGCGATTCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGCAGGTTGTCAGCGGTTTTTACGAGGGGCTGACGATGGCCTggcggggggcgg  >  2:182293/1‑245 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                               
GTTGAAGTACCCGCCGTCTATGCTGGTCTTGAGCGGAAACAGCGACTGCTTCGTGCCCAGGAGTTGCTGCAACGGCTGGGGCTGGAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATCCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGATGGCATGGCGGGCGCTGG  >  NC_000913/920665‑921142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: