| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,517,587 | 2 bp→TT | intergenic (+25/‑60) | ortT → / → ydcY | orphan toxin OrtT/DUF2526 domain‑containing protein YdcY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,517,587 | 0 | C | T | 100.0% | 45.4 / NA | 16 | intergenic (+25/‑61) | ortT/ydcY | orphan toxin OrtT/DUF2526 domain‑containing protein YdcY |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (7/9); total (7/9) | |||||||||||
| * | NC_000913 | 1,517,588 | 0 | C | T | 100.0% | 43.8 / NA | 17 | intergenic (+26/‑60) | ortT/ydcY | orphan toxin OrtT/DUF2526 domain‑containing protein YdcY |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (8/9); total (8/9) | |||||||||||
CTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCACCACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATTGAAGAGAGCGTCATTGCCCATATGAACGAATTATTAATCGCCCTGAGCGATGACGCGGAGTTAAGTCGGGAAGATCGCTACACCCAGCAGCAACGTCTGCGCACAGCGATCGCCCATCACGGTCGC > NC_000913/1517371‑1517818 || ctggctggACGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGAAATCGAATTTCTTATCACCTGATTTCTTTCTCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATa > 1:55649/1‑250 (MQ=255) ggTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGAAGTCATcgcn < 1:43995/251‑2 (MQ=255) ggCAGCAATCGCACTTCTTATCACCTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGAAGTCATCGCGCGCGTg > 1:272816/1‑251 (MQ=255) cTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACaan < 1:217036/178‑2 (MQ=255) cTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCANTACNNNNNCtnnnnnn > 2:217036/1‑144 (MQ=255) tctttctCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGGTGAATCGATAAGTTTCACAAGTGGCGAATGAGAAAGTATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATGGAAGAGAGCGTCATTGc < 1:263975/250‑1 (MQ=255) ctcACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGCTGAGTTTCCCGGTGGCGATGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACAAGTGGCTACGGAGAAAGTATGTCGCCTCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATTGAAGAGAGCGTCATTGCCCatat > 1:152924/1‑251 (MQ=255) aCGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGAAGTCATcg < 1:202159/205‑1 (MQ=255) cGATAAGAAACGCATCCGTTTCTGAAGCGCCGTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCGGGTGGCGCTGTTGTTGTTGCTTTTTTAAATCTTATGCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATAAATTTc < 1:173409/158‑1 (MQ=255) cTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGATGTCGTTTTCAATGTTTTAAATCTTACTCACTGGCTTGCCCGCATTACGCAGCCTTATCTCATTTGGATGAATCGCTAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGACGTCATCGCGCGCGTGGATGCCGCGATTGAAGAGAGAGACATTGCCCATATGAACGAATTATTAATCGCCCTGAGc > 1:228900/1‑251 (MQ=255) aGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTTGATGAATCGATAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGAAGTCATCGCGCGCGGGGATGCCGCGATTGAAGAGAGCGTCATTGCCCATATGAACGAATGATTAATCGCCCTGAGCGATGACGCGGCGTTAAGTCGGGCAGATCGCTACAccc > 1:24509/1‑251 (MQ=255) gcgcTGTTGTTTTCACTGTTTTAAATCTTACACACTGGCTTGACGGCATTACGCAGACTTATATCAGTTGGATTAATCGATAAATGTCACAAGTGGCTAAGTATAAAGTATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATTGAagagagn < 1:35970/163‑2 (MQ=255) ctcTGTTGTTTTCACTGTTTTAAATCTTACTCACTTGCTTGACGGCATTACGCAGACGTATATCATTTGGATGAAGCGATAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATTGAAGAGAGCGTCATTg < 1:202592/167‑1 (MQ=255) aaaTCTTACTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGTCGCGATTGAAGAGAGCGTCATTGCCCATATGAACGAATTATTAATCGCCCTGAGCGATGACGCGGAGTTAAGTCGGGAAGATCGCTACACCCAGCTGCAACGTCTGCGCACAGCGATCGCCCATc < 1:278947/250‑1 (MQ=255) cTCACTGGCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATTGAAGAGAGCGTCATTGCCCATATGAACGAATTATTAATCGCCCTGAGCGATGACGCGGAGTTAAGTCGGGAAGCTCGATACACCCAGCAGCAACGTCTGCGCACAGCGATCGCCCATCACGGTCGc > 1:264385/1‑250 (MQ=255) gtcNTNANGGCATTACGCAGACTTATATCATTTGGATNAATCGATAAATTTCACAAGTGGCNNAGNNNAANNTaggt < 2:258346/75‑4 (MQ=255) ggCTTGACGGCATTACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACACGTGGCTAAGGAGAACGTATGt > 1:258346/1‑77 (MQ=255) || CTGGCTGGACGCCCGTACATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAAATCTTACTCACTGGCTTGACGGCACCACGCAGACTTATATCATTTGGATGAATCGATAAATTTCACAAGTGGCTAAGGAGAAAGTATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATTGAAGAGAGCGTCATTGCCCATATGAACGAATTATTAATCGCCCTGAGCGATGACGCGGAGTTAAGTCGGGAAGATCGCTACACCCAGCAGCAACGTCTGCGCACAGCGATCGCCCATCACGGTCGC > NC_000913/1517371‑1517818 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |