| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,253,002 | C→T | intergenic (+17/+83) | dhaR → / ← ycgV | DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,253,002 | 0 | C | T | 100.0% | 21.9 / NA | 9 | intergenic (+17/+83) | dhaR/ycgV | DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (5/4); total (5/4) | |||||||||||
CCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTCTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACT > NC_000913/1252813‑1253236 | nnnnnnnncNGTNNTTTGNGGAAGTTGAAAAAGAGGCAATTATNAACGCAGCCCAGGTCACAGGCGGTCGCATTCNGNAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAANGAAGCAACATNGCANNGATGNANGNCAGTTTAAGCGCCGGGTATGAAAGACAGANACGATGTTTGATACATCAGAGGGNNCTNNNTTNNATTcc < 2:266628/213‑1 (MQ=255) ggTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGAGCGGCCGCACTACGCTTAGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCTCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTAt < 1:345789/210‑1 (MQ=255) gNCGCATTAAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTCCGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCCGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAACCGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGTCGCACGCTAACAATTTTCAGCATCGTTTAAGGACTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCaa > 1:275516/1‑250 (MQ=255) gCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAACATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAggg > 1:327247/1‑170 (MQ=255) gATCGGCCGCACTACGCTGTGGCGGACAATGAAGCAACATTGCATTGATACCGGGCACTTTAAGCGCCGGGGATGAAAGACAGCCACGATTTTTGATACATCAGAGTACACTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCCTCGTTTAAg > 1:235778/1‑157 (MQ=255) ncGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGACGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCt > 1:42623/2‑251 (MQ=255) ggAAAATGAAGCCACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATcc > 1:127304/1‑147 (MQ=255) aaGCAACATGGCATTGATGCAGGGCANTTTAAGNNCCNCGTATGAAAGACAGAAACGNTTNNNGNNNCNTCAGANGGNNCTGTATTTCNTTCGGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCNCTTAAAAGCNNAAGCGATATCCTCCGTTAACTNg > 2:76814/1‑177 (MQ=255) aaGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCGATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTGGACTTg < 1:76814/177‑1 (MQ=255) aaGACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGTGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTAACCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTTATCAAAGAGGTTACCCTGCTTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCCCTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACt < 1:13572/251‑1 (MQ=255) | CCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGAAAGACAGAAACGATTTCTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACT > NC_000913/1252813‑1253236 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |