| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 708,774 | G→A | A147A (GCG→GCA) | chiP → | chitooligosaccharide outer membrane channel |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 708,774 | 0 | G | A | 100.0% | 20.0 / NA | 9 | A147A (GCG→GCA) | chiP | chitooligosaccharide outer membrane channel |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/4); total (5/4) | |||||||||||
ACCTGGAATGCCAACCTCGATTTTCAGTCCGGTTATGCTGCTGATATGTTCGGCCTTGATATTGCTGCGTTTACGGCGATTGAAATGGCGGAAAACGGCGACAGCTCCCACCCGAACGAAATCGCGTTTTCAAAAAGTAATAAAGCCTATGACGAAGACTGGTCCGGCGACAAAAGCGGTATAAGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCGGTTTGGGCGAGGGCAGGTTACATTCAGCCAACTGGTCAAACGCTGTTAGCGCCGCACTGGAGCTTTATGCCAGGTACTTATCAGGGGGCGGAAGCCGGGGCGAATTTTGATTACGGCGATGCTGGTGCGTTGAGTTTCTCC > NC_000913/708544‑708906 | aCCTGGAATGCCAACCTCGATTTTCAGTCCGGTTATGCTGCTGATATGTTCGGCCTTGATATTGCTGCGTTTACGGCGATTGAAATGGCGGAAAACGGCGACAGCTCCCACCCGAACGAAATCGCGTTTTCAAAAAGTAATAAAGCCTATGACGAAGACTGGTCCGGCGACAAAAGCGGTATAAGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCTGTTTGGGCAAGGGCAGGTTACATTCAGcc < 1:95969/251‑1 (MQ=255) gcGTTTACGGCGATTGAAATGGCGGAAAACGGCGACAGCTCCCACCCGAACGAAATCGCGTTTTCAAAAAGTAATAAAGCCTATGACGAAGACTGGTCCGGCGACAAAAGCGGTATAAGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCGGTTTGGGCAAGGGCAGGTTACATTCAGCCAACTGGTCAAACGCTGTTAGCGCCGCACTGGAGCTTTATGCCAGGTACTTATCAggn < 1:218570/242‑2 (MQ=255) gtaaaaCGGCGACAGCTCCCACCCGAACGAAATCGCGTTTTCAAAAAGTAATAAAGCCTATGCCGAAGACTGGTCCGGCGACAAAAGCGGTATAAGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCGGTTTGGGCAAGGGCAGGTTACATTCAGCCAACTGGTCAAACGCTGTTAGCGCCGCACTGGAGCTTTATGCCAGGTACTTATCAGGGGGCGGAAGCCGGGGCGAAtt > 1:335571/3‑239 (MQ=255) gAAAACGGCGACAGCTCCCACCCGAACGAAATAGCGTTTTCAAAAAGTCATAACGCCTATGAAGACGATTGGTCAGGCGACACAACCGGCATCGGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCAGGCTTGGGCAAGGGCAGCTTACATTCCCCCACCTGGTCCAACACTGTTAGCGCCGCACTGGAGCTTTCTGCCAGGTACTTATCAGGGGGCGGACGCCgg > 1:167965/1‑230 (MQ=255) ncGACAGCTCCCACCCGAACGAAATCGCGTTTTCAAAAAGTAATAAAGCCTATGACGAAGACTGGTCCGGCGACAAAAGCGGTATAAGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCGGTTTGGGCAAGGGCAGGTTACATTCAGCCAACTGGTCAAACGCTGTTAGCGCCGCACTGGAGCTTTATGCCAGGTACTTATCAGGGGGCGGAAGCCGGGGCGAATTTTGATTACGGCGATGCTGGt > 1:220916/2‑251 (MQ=255) ccGGCGACAAAAGCGGTATAAGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCGGTTTGGGCAAGGGCAGGTTACATTCAg > 1:144062/1‑86 (MQ=255) aaGCGGTATAAGCCTGTATAAAGCTGCGGCCAANTTTNAATANGGNCCGGTTTTGGCAAGGNCAGGTTACATTCAGCCAACTGGTCAAACGCTGTTAGCGCCGCACNNGNNNTNTATGCCAg < 2:243798/122‑1 (MQ=255) naNCCNGTATANAGCTNCGGCCAAATTTAAATNCGGTCCGGGTTGGGCAAGGNNANGTTACNTTCAg < 2:144062/66‑1 (MQ=255) gCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCGGTTTGGGCAAGGGCAGGTTACATTAAGCCAACTGGTCAAACGCTGTTAGCGCCGCACTGGAGCTTTCTGCCAGGTACTTATCAGGGGGCGGAAGCCGGGGCGAATTTTGATTACGGCGATGCTGGTGCGTTGAGTTTCTcc > 1:54181/1‑179 (MQ=255) | ACCTGGAATGCCAACCTCGATTTTCAGTCCGGTTATGCTGCTGATATGTTCGGCCTTGATATTGCTGCGTTTACGGCGATTGAAATGGCGGAAAACGGCGACAGCTCCCACCCGAACGAAATCGCGTTTTCAAAAAGTAATAAAGCCTATGACGAAGACTGGTCCGGCGACAAAAGCGGTATAAGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCGGTTTGGGCGAGGGCAGGTTACATTCAGCCAACTGGTCAAACGCTGTTAGCGCCGCACTGGAGCTTTATGCCAGGTACTTATCAGGGGGCGGAAGCCGGGGCGAATTTTGATTACGGCGATGCTGGTGCGTTGAGTTTCTCC > NC_000913/708544‑708906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |