| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 71,170 | T→C | S262P (TCG→CCG) | araC → | DNA‑binding transcriptional dual regulator AraC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 71,170 | 0 | T | C | 100.0% | 69.0 / NA | 23 | S262P (TCG→CCG) | araC | DNA‑binding transcriptional dual regulator AraC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (13/10); total (13/10) | |||||||||||
CGCGAGGCTTGTCAGTACATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGACGGAGTAGCATAGGGTTTGCAGAATCCCTGCTTCGTCCATTTGACAGGCACATTATGCAAGCATT > NC_000913/70924‑71361 | cgcgAGGATTATCAGTACATCAGCGATCACCTGGCAGACAGCAATTTTGATATCCCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTAGCGTCTGTCACATCTTTTCCGCAAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTAACCGGATGCATATAGCCACCGTCGGTCGCAATGTTGGTTTTGACGCTCAACTCTATTTCCcgcg > 1:253102/1‑251 (MQ=255) ngCTTGTCAGTACATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTAt > 1:91361/2‑251 (MQ=255) tttGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTg < 1:287559/250‑1 (MQ=255) gATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCan < 1:105035/221‑2 (MQ=255) gTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGccc < 1:49174/209‑1 (MQ=255) gTCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTAGCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTgg < 1:52061/251‑1 (MQ=255) tCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCGGGCGCGAGGACCAACTCATTAGTCAGGCGAAGCTCCTTTTGAGCACGACCCGGATGCCTTTCGCCACCGTCGGTCGCAAGGTTGGTTTTGACGAGCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCcga < 1:156727/187‑1 (MQ=255) cacaTCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTCTTTTCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGt > 1:343927/1‑250 (MQ=255) tCTTTGCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTTCCCGGATGCCTATCGCCACCTTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCgggn < 1:67877/173‑2 (MQ=255) ttttCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCcgan < 1:216221/181‑2 (MQ=255) aTTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGan < 1:218682/251‑2 (MQ=255) gCTGGCGCGAGGACCAACGCCTTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCCTCGGTCGCAATGTTGGTTTTGACGATCAAATCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGACGGAGTAGCATAgg > 1:230618/1‑251 (MQ=255) ngcgAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGACGGAGTAGCATAGGGTTTg > 1:70567/2‑251 (MQ=255) aaCGCACTAGTCAGGCGAAGCTGCTTNTGAGCANNACNCGGATGCCTATCGCCACCGNCGNNNGNNNTNTTGGTNTTNNCGCTCAACTNTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCACGAGCGAGTATCGNGCCGGTTGGNNAGCAAAAGTGAATGATGTAGCNGTCnngnngnactna > 2:79552/1‑185 (MQ=255) cATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCcgagc > 1:200604/1‑130 (MQ=255) aGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCGCCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGGCATAATTGGTAACGAATCAGACAATTGACGGCTTGACGTAGTAGCATATGGGTTGCAGAATCCCTGCTTCGTc < 1:310130/251‑1 (MQ=255) gAGCACTACCCGGATGCCTATCGCCTCCGTCGGTCGCAATGTTGGTTTTGACGATCAACTTTATTTCCCGCGAGTATGTAAAAAACGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTgaag < 1:54551/128‑1 (MQ=255) gCACTACCCGGATGCCTATAGCCACCGTAGGTAGCAATGTTGGTTTTGGCGATCAAATCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCCGCCAGCGCGAGTTTCGTGCCGGTtgggcaga > 1:239853/1‑121 (MQ=255) aCCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAAATCTATTTCCCGCGAGAATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTAGTGCCGGTTGTGACGAAAAAGTGCATGATGTAGCCGTCACGTTGTCATAATTGGAAAAGAATCAGAAAATTGACg > 1:236646/1‑181 (MQ=255) cccGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCGATTTGCCGCGAGTGTTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAACAAGTGAATGATGTAGCCGTCAAGATGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGACGGAGTAGCATCGGGTTTGCAGAATCCCTGCTTCGTCCATTTGACAGGCACATTATGCAAGCAtt > 1:254983/1‑251 (MQ=255) ccTATNNCCNNNGTNNGTCGCAATGTTGGTTTTGACGATNAACTCTATTTCCCGCGAGTATTTAAAAAANGNANCGGGNNCAGNCCGAGCGAGTNTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCNTNATTGGTAACGAATCAGACAATTGACGGCTTGNCGGAGTAGCATAGGGTTTGCAGAANCCCTNNTTNgnnnnnnnn > 2:257939/1‑213 (MQ=255) ccTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGGTCAACTCTATTTCCCGCGAGTATTTCAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGGGAATGATGTACCCGTCTATTTGTCATCATTGGTAAc > 1:195494/1‑155 (MQ=255) gCAATGTTGGTTTTGACGATCAACTCTATTTCCCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGTCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACACTTGACGGCTTGACGGAGTAGCATAGGGTTTGCAGAATCCCTGCTTCGTCCATTTGAc > 1:316739/1‑204 (MQ=255) | CGCGAGGCTTGTCAGTACATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAATTGGTAACGAATCAGACAATTGACGGCTTGACGGAGTAGCATAGGGTTTGCAGAATCCCTGCTTCGTCCATTTGACAGGCACATTATGCAAGCATT > NC_000913/70924‑71361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |