| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,473,900 | C→T | G52R (GGA→AGA) | bdcA ← | c‑di‑GMP‑binding biofilm dispersal mediator protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,473,900 | 0 | C | T | 100.0% | 34.0 / NA | 13 | G52R (GGA→AGA) | bdcA | c‑di‑GMP‑binding biofilm dispersal mediator protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (7/6); total (7/6) | |||||||||||
CGATGATTAAGATGCGCCCGCCTTCGGGCATCTGCCGGGCGGCTTCAACAGAGGCATGATAAGGAGCATGAATATTGATTTTGAAAAGGCGATCAATATCGTCGGCATTTAATTCCAGGGCCTCGCCAAAGACGCCAATACCTGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCCAGTCTCTTGTGCCAGGCGTTTAGCGGCATCTTTCGACCCCGCATAGGTGAATCGTACATTGGCCCCATCGGTGACGAAACGACGTACGATAGCGGCACCGATACCACGACTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTA > NC_000913/4473663‑4474087 | cGATGATTAAGGTGCGCCCGCCTTCGGGCATCTGCCGGGCGGCTTCAACAGAGGCATGATAAGGAGCATGAATATTGAGTTTTAAAAGGCGATCAATATCGGCGGCATTTAATTCCAGGGCCTCGCCAAATACGCCAAGACCTGCATTTACCACCAGGATATCCAATGCTCCGGTCTGACGAACGACATCAATGACAGCATTTCTGTCAGCGCGAGCTGTGAATACTGCTGTCGCTCTAGTCTCTTGTGcc < 1:234785/251‑1 (MQ=255) aGATGCGCCCGCCGTCGGGCATTTGCCGGGCGGCTTCAACAGAGGCATGATAAGTAGCATGAATATTGATTTTGAAAAGGCGATCAATATCGTCGGCATTTAATTCCAGGGCCTCGCCAAAGACGCCAATACCTGCATTTACCACCAGTATATCCAATGCGCCGCTCTTACGAACGACATCAATTACAGCTTCTCTGTCAGCACTATCTGGGAATACTGCTGGCGCTCTAGTCTCTTGTGCCAGGCGTTTa < 1:342791/251‑1 (MQ=255) cATCTGCCGGGCGGCTTCAACAGAGGCATGATAAGGCGCACAAATATTGATTTAGAACAGGCGACAAATCTCGACGGCATTTAATTCCAGGGCCTCGACACAGAGGCCAATACCTGCATTCCCCACCAGCATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTCTCAGTCAGAACTATCTGTGAATACTGCTGACGCTCTAGTCTCTTGTGCCAGGAGTTTAGCGGCATCTTTCGAccccc > 1:173249/1‑250 (MQ=255) cATCTGCCGGGCGGCTTCAACAGAGGCATGATAAGGAGCATGAATATTGATTTTGAAAAGGCGATCAATATCGTCGGCATTTAATTCCAGGGCCTCGCCAAAGACGCCAATACCTGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCTAGTCTCTTGTGCCAGGCGTTTAGCGGCATCTTTCGACCCCg < 1:202746/251‑1 (MQ=255) gcTTCAACAGAGGCATGATAAGGAGCATGAATATTGATTTTGAAAAGGCGATCAATATCGTCGGCATTTAATTCCAGGGCCTCGCCAAAGACGCCAATACCTGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCTAGTCTCTTGTGCCAGGCGTTTAGCGGCATCTTTCGACCCCGCATAGGTGAATCg > 1:153030/1‑251 (MQ=255) gCATGATAAGGAGCATGAATATTGATTTTGAAAAGGCGATCAATATCGTCGGCATTTAATTCCAGGGCCTCGCCAAAGACGCCAATACCTGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCTAGTCTCTTGTGCCAGGCGTTTAGCGGCATCTTTCGACCCCGCATAGGTGAATCGTACATTGGcccc > 1:262500/1‑251 (MQ=255) gtcgGCATTTAATTCCAGGGCCTCGCCAAAGACGCCAATACCGGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCCATGACAGCGTCTCTGTCAGCCCTATCTGTGAATACTGCTGTCGCTCTAGTCTCTTGTGCCAGGCGTTTCGCGGCATCTTTCGACCCCGCCTAGGTGAATCGTACATTGGCCCCATCGGTGACGAAACGACGTACGATAGCGGccccagatcagcagagc > 1:119674/1‑234 (MQ=255) cATTTAATTCCAGGGCCTAGCCAAAGACGCCAATACCTGACTTTACCACCAGGATATCAAATGCGCAGCTCTTACGAACGACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCTAGTCTCTTGTGCCAGGCGTTTAGCGGCATCTTTCGACCCCGCATAGGTGAATCGTACATTGGCCCCATCGGTGACGAAACGACGTACGATAGCGGCAc > 1:55032/1‑231 (MQ=255) cANNNNNTTCNAGGGCCTCGCCAAAGACGACAATACCTGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCTAGTCTCTtgtg < 2:223786/144‑1 (MQ=255) cgcGCCAAAGACGCCAATACCTGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTGTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCTAGTCCCTTGTGCCAGGCGTTTAGCGGCACCTTTCGACCCCGCATAGGTGAATCGTACATTGGCCCCATCGGTGACGAAacgaag > 1:185002/3‑199 (MQ=255) cGCCAAAGACGCCAATACCTGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCTAGTCTCTTGTGCCAGGCGTTTAGCGGCATCTTTCGAcc < 1:187344/153‑1 (MQ=255) ccTGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCTAGTCTCTTGTGCCAGGCGTTTAg > 1:234305/1‑121 (MQ=255) tACGAACTACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCTAGTCTCTTGTGCCAGGCGTTTAGCGGCATCTTTCGACCCCGCATAGGTGAATCGTACATTGGCCCCGTCGGTGACGAAACGACGTACGAGAGCGGCACCGATGCCACGTCTGTCTCCGAGGAGGAGAACGGTCTTAACTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTa < 1:342363/248‑1 (MQ=255) acgaCNTCAATNANNGCGTCTCTGTCAGCACTATNTGTGAATACTGCTGTNGCTCNAGTctntantn > 2:153596/1‑63 (MQ=255) nnnnnngcnnNNNCTCNAGGCTCTTGTGCCAGGCGTTTAGCGGCATCTTTCGACCCCGCATAGGGGAATCGTACATTGTCCCCATCGGTGACGAAACGACGTACGATAGCGGCACCGATACCACGACTGCCACCGAGGATGATAACTGTc < 2:223705/144‑1 (MQ=255) | CGATGATTAAGATGCGCCCGCCTTCGGGCATCTGCCGGGCGGCTTCAACAGAGGCATGATAAGGAGCATGAATATTGATTTTGAAAAGGCGATCAATATCGTCGGCATTTAATTCCAGGGCCTCGCCAAAGACGCCAATACCTGCATTTACCACCAGGATATCCAATGCGCCGCTCTTACGAACGACATCAATGACAGCGTCTCTGTCAGCACTATCTGTGAATACTGCTGTCGCTCCAGTCTCTTGTGCCAGGCGTTTAGCGGCATCTTTCGACCCCGCATAGGTGAATCGTACATTGGCCCCATCGGTGACGAAACGACGTACGATAGCGGCACCGATACCACGACTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTA > NC_000913/4473663‑4474087 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |