| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,223,638 | 0 | T | C | 100.0% | 23.9 / NA | 9 | intergenic (‑10/‑190) | iclR/metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (3/6); total (3/6) | |||||||||||
GTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTTAAATGAACGTATTC > NC_000913/4223493‑4223876 | gTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCgtggn < 1:222214/251‑2 (MQ=255) cAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTTGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTGCGGAACTGATCCGGTGAGTTAATTTTGAACAAATCTCATGTTGCGTGGTGGTCGTTTTTACCACAGATGCGTTTATGCCAGTATGGTttgtt < 1:339734/251‑1 (MQ=255) gACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGGTTTTTGCAGCGCTTTGCGGGGCTGGGGGGGGCCCTGACAGTCTCCTTTTTCTGTTTCCTGGAAATCACTTTTATTTTTATTGTTTGCTAATGCCATAGTTAATGAAATGATCCGGTGAGTTAATGTTGTACAAATCTCATGTTGCGTGGGGGGCGCTTTTTACACAGATGCGTTTATGCCAGTATGGTTTTTTTAAtttttttttaatt > 1:290168/1‑243 (MQ=255) ggTGCGGTGGCAACGGCTGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCGCCTTTTTCTGTATCGTGGAAAGCATTTTCATTTTTATTGTTAGCTAATga < 1:190754/114‑2 (MQ=255) cGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTaac < 1:337244/180‑3 (MQ=255) gCAACGGCGGGTTTTCGGCCGCTTGTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGAGGAGTTAATGTTGAACAAATCGCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTGTGTTGAATTTTTAGTAAATCTGGGTTGAGCGTGTCTGGAGCAAGTGTGng < 1:278507/251‑1 (MQ=255) tCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCgtggt < 1:352376/148‑1 (MQ=255) naTGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTACTGCACTAGTTACTGAACTGCTCCGATGCGTTAATGTTGACCAAATATCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTTAAATGAACGTATTc > 1:64050/2‑251 (MQ=255) tGACAGTCTCCTTTTTCTGTATCGTGNAAATCANNTTNATTTTTATTGTTAGCTAATNCANNNGNNNCNGAACTNATNNGATGAGTTANTGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACAACAGATGCGTTTANGCCAGTATGNNTTGTTGAATTTTTATTAAATCNGGGNNGNNCNTGTNggn > 2:83810/1‑192 (MQ=255) | GTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTTAAATGAACGTATTC > NC_000913/4223493‑4223876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |