| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 771,449 | IS1 (–) +9 bp | intergenic (+838/‑1) | mngB → / → cydA | alpha‑mannosidase/cytochrome bd‑I subunit 1 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 257908 = | NA (NA) | 17 (1.090) | 13/308 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 771457 | 0 (0.000) | intergenic (+846/‑1) | mngB/cydA | alpha‑mannosidase/cytochrome bd‑I subunit 1 | |||||
| * | ? | NC_000913 | = 258675 | NA (NA) | 19 (1.220) | 16/308 | 0.0 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 771449 = | 0 (0.000) | intergenic (+838/‑9) | mngB/cydA | alpha‑mannosidase/cytochrome bd‑I subunit 1 | |||||
GTCGAAAAATGCAAATTTGCTTCAACAAAAACCTGTTTATTGTAAGGATTTTGCGGCGTAATATATACGTGGGATCAATTTGAGTTTTTATTAACATGTTTGCAACCTTTCTTTACGCCGTTTTTGTGTGCATTCACATGGTATGATGAAAGTGTTCAAACAAATTTCTATTGGGGCATGCGTGTGACCCTTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTGGGTGTGGCTACCGGTCTGACCATGGAGTTCCAGTTCG > NC_000913/771216‑771689 | ccatatcaatgattttctggtgcgtaccgggttgagaagaggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGCGTCATGATGtt > 1:313564‑M2/234‑247 (MQ=255) gCAAATTTGCTTCAACAAAAACCTGTTTATTGTAAGGATTTTGCGGCGTAATATATACGTGGGATCAATTTGAGTTTTTATTAACATGTTTGCAACCTTTCTTTACGCCGTTTTTGTGTGCATTCACATGGTATGATGAAAGTGTTCAAACAAATTTCTATTGGGGCATGCGTGTGACCCTTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGggtaatgactccaacttat < 1:23793‑M2/251‑20 (MQ=255) cgtaccgggttgagaagcgttgtaagtgatctgcagttgccatgttttacggcagggatagcagagatagcgctgatgtccggcggtgctgttgccgttacgcgcccccccgtcagtagctgaacaggagggacagcggatagaaacagaagcctctggagcacctcaaaaacaccatcgtacactaaatcagtaagtgggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTAc < 1:231607‑M2/40‑1 (MQ=255) cccgggttgagaagaggtgtaagtgacctgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGt > 1:95033‑M2/209‑251 (MQ=255) ncggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttaagcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAAc > 1:209294‑M2/196‑223 (MQ=255) aaGGATTTTGCGGCGTAATATATACGTGGGATCAATTTGAGTTTTTATTAACATGTTTGCAACCTTTCTTTACGCCGTTTTTGTGTGCATTCACATGGTATGATGAAAGTGTTCAAACAAATTGCTATTGGGGCATGCGTGTGACCCTTTCTAACGGGGGTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat > 1:179830‑M2/1‑199 (MQ=255) ggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggcgggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcacacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTc > 1:50452‑M2/162‑251 (MQ=255) gagatagcgctgatgtccggcggtgcttgtgtcgtgacgcaccagcccggcagtagctggacaggagggacagctgatagaaacagaagccagtgtagcacctcaaaagcaccatcatacacgaaatcggtaagttggcagcatcaccGGAGTCATGATGTTAGat < 1:163239‑M2/18‑1 (MQ=255) cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGc < 1:13558‑M2/110‑1 (MQ=255) nnnnnnnnnncgnnnnncacnaccccgtcagtagctgaacaggagggacagctgatagaaacagaagcctctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAAc < 2:209294‑M2/28‑1 (MQ=255) gtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATg < 1:20034‑M2/60‑1 (MQ=255) cATTCACATGGTATGATGAAAGTGTTCAAACAAATTTCTATTGGGGCATGCGTGTGACCCTTTCTAACGGGGTTCACTCTCGGAGTCCGCATGCGATGAGCAAGGAGTTATGggtaatgacgccaacttattgctagtgctttatgttcagataatgcccgctgactttgtcatgcagctcccccgagtttgagaacgacagcgacctccggcccatccgtgccaggtgctgcctcagattcaggttatgc > 1:139304‑M2/1‑112 (MQ=255) aTTCACATGGTATGATGAAAGTGTTCAAACAAATTTCTATTGGGGCATGCGGGTGACCCTTTCTAACGGGGTTCACTCTCGGAGTCTGCATGCGATGAGCAAGGAGTTATGtgtaatgactccaacttattgatagtgttttatgttcagataaggcccgatgactttgtcatgcagctccaccgattttgagagcgacagcgacttccgtcccagccgcgccaggtgctgcctcagattcaggttatgcn > 1:34572‑M2/1‑111 (MQ=255) atgaAAGTGTTCAAACAAATTTCTATTGGGGCATGCGTGTGACCCTTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagagtcaggtgatgccgc < 1:2901‑M2/239‑143 (MQ=255) gagggaccncnnntnncaacagaagccactggagcacctcaaaaacaccatcatacactanatcagtaagttggcancancaccNGCGNCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCNAttntggcanngntctccgnnntcnnnnnnnncnnnnatnntnn > 2:252687‑M2/85‑219 (MQ=255) tCAAACAAATTTCTATTGGGGCATGCGTGTGACCCTTTCTCACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCACGGAGTCCTGggtaatgactccaacttattgatagtgttttatgttcagatactgcccgatgagtttgccatgcagctccaccgattttgagaacgacagcgacttcagtcccagccgtgcccggtgctgcctcagat < 1:205651‑M2/215‑129 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCTCGCTTACAGTTTGCCTTGAc < 1:108075‑M2/53‑1 (MQ=255) aacaaaTTTCTATTGGGGCATGCGTGTGACCCTTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca > 1:204532‑M2/1‑84 (MQ=255) gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCGCGGTGTGGCGTTCCTTCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGc < 1:252687‑M2/177‑1 (MQ=255) caaaTTTCTATTGGGGCATGCGTGTGACCCTTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccan > 1:66457‑M2/1‑82 (MQ=255) gaagccactggagcacctcaaaaacaccatcagacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTgg < 1:5988‑M2/188‑1 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCa > 1:8035‑M2/58‑250 (MQ=255) gACCCTTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtagatcgcttgctgattacgtgcagctttcccttcagg > 1:10161‑M2/1‑57 (MQ=255) gACCCGTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagn > 1:35480‑M2/1‑57 (MQ=255) cctcaaaaacaccatcatacactcaatcagtaagttggcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCa > 1:79108‑M2/49‑190 (MQ=255) aCCCTTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTAATGggtaatgactcaaacttattgctagtgttttatgttcagataatgcccgatgactttgtcatgccgctccaccgattttgagaacgacagcgtcttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcg < 1:349056‑M2/251‑196 (MQ=255) ccTTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcag > 1:20059‑M2/1‑54 (MQ=255) tcatacactaaatcagtaagttggcagcatcacaGGAATCAAGATGTTAGATATAGTAGAAATGTCGCGATTATAGTTTGCCTTGACCGCGATGTACAACTTCCTTTTTGTGCCACTGACGCTCGGTCTGCAGTTCCACCTGGCCATTATGGAAACGGTCTACGTACTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTATGGGGCAAGTTGTTTGGTATAAACTTCGCTCTGTGTGTGGCTACCg > 1:262621‑M2/35‑251 (MQ=255) cactaaatcagtaagttggcagcatcaccGGAGTGATGATGTTAGATATAGTCGCACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTa > 1:135700‑M2/30‑91 (MQ=255) gcagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCTCTCATACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACg < 1:240690‑M2/87‑1 (MQ=255) gCGATGAGCAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattagctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggcttcatacagcggccagccatccgtcatccatat < 1:291648‑M2/251‑232 (MQ=255) cagcatcaccGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCGGGGTGTTGCTACCGGTCTGACCATGGAGTTCCAGTTCg < 1:143728‑M2/241‑1 (MQ=255) cGATGAGCAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcggatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatc > 1:287290‑M2/1‑19 (MQ=255) ncaAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgc < 1:210826‑M2/166‑155 (MQ=255) cAAGGAGTCATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccgccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggatt > 1:134443‑M2/1‑12 (MQ=255) nggAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTGGGTGTGGCTACCGGTCTGACCATGGAGTTcc > 1:87745/2‑236 (MQ=255) | GTCGAAAAATGCAAATTTGCTTCAACAAAAACCTGTTTATTGTAAGGATTTTGCGGCGTAATATATACGTGGGATCAATTTGAGTTTTTATTAACATGTTTGCAACCTTTCTTTACGCCGTTTTTGTGTGCATTCACATGGTATGATGAAAGTGTTCAAACAAATTTCTATTGGGGCATGCGTGTGACCCTTTCTAACGGGGTTCACTCTCGGAGTCTTCATGCGATGAGCAAGGAGTCATGATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTGGGTGTGGCTACCGGTCTGACCATGGAGTTCCAGTTCG > NC_000913/771216‑771689 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |