New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 25586980 (0.000)8 (0.540) 7/292 0.5 100% intergenic (‑19/‑160) eutB/intZ ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ
?NC_000913 2565489 = 0 (0.000)coding (1396/1404 nt) eutA ethanolamine ammonia‑lyase reactivase EutA

CGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGA  >  NC_000913/2558549‑2558910
                                                                                                                                                     |                                                                                                                                                                                                                    
cgcTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatg                                                                                                                 >  1:27162‑M1/1‑150 (MQ=255)
                  ccggcgaCGCCCGCCAGCACATCCCCCGAACGCAGTTCGGTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCGTTAGTTTCAGAAGTCGTGCCCTCAGGAAGgaaatgcgagtgattgcaccgtcacctgcacaaccgatccgccaaaaagaggcgtaccaatgtctatatactcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgt                                                                                               <  1:167931‑M1/248‑120 (MQ=255)
                     gCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCAACTCTTTTACATACTTAAACTGATATACCTTGCCGACCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcccaaccgatcc                                                                                                                                                                              >  1:240334‑M1/1‑129 (MQ=255)
                                                               ttAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaan                                                     <  1:104299‑M1/248‑162 (MQ=255)
                                                                 agccagccCCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcccaaccgagccgtcaaaaagaggcgtaccaatggcgatatagtccccctcgcggacattctcttcgtcaaggactgtcaacgggagttgttgtagcttggggcgcaacaacatgcccagagctttaccaaagtcct                                                 <  1:268137‑M1/250‑166 (MQ=255)
                                                                                       ttNAACTGNTATANATTGCCGAACAATGTNGTCGTTAGATTCATAAGTCNNTNCCTCANgaagg                                                                                                                                                                                                                     <  2:138340/64‑2 (MQ=37)
                                                                                                        gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacg         >  1:299882‑M1/1‑46 (MQ=255)
                                                                                                               aaTGTGGGCTTTAGTTTCAAAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatggcgagatagtcccccgcgcggacaatcagtgcgtcaaggacggccaacgggaggtgttgtagctgtgggcgcaacaccatgcccagagctttaccaaattcctgcccggcgcccaccagcaggggatgcggattcggaaaacgcgcgacg  <  1:348874‑M1/251‑213 (MQ=255)
                                                                                                                                 aTAAGGCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacgtcgtcaatgacggccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggatt                  <  1:155185‑M1/217‑197 (MQ=255)
                                                                                                                                                     |                                                                                                                                                                                                                    
CGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGA  >  NC_000913/2558549‑2558910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.