| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,239,316 | IS5 (–) +4 bp | intergenic (‑27/+31) | mglA ← / ← mglB | D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit/D‑galactose/methyl‑galactoside ABC transporter periplasmic binding protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2239316 = | 1 (0.070) | 18 (1.160) | 13/308 | 0.1 | 94.6% | intergenic (‑27/+34) | mglA/mglB | D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit/D‑galactose/methyl‑galactoside ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 2239319 | 0 (0.000) | 12 (0.780) | 10/304 | 0.3 | 100% | intergenic (‑30/+31) | mglA/mglB | D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit/D‑galactose/methyl‑galactoside ABC transporter periplasmic binding protein |
| ? | NC_000913 | 2288919 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
CTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACAGGCATTTTAATAATGTCGATTTTCCTGCACCGTTTTCCCCCATTAATGCATGGATAGAATGTGGCCGGACTTTTAAATTAACGTTATCAAGTGCCTTAACACCAGGAAAGGACTTGTTGATACCGCTCATTTCCAACAAGTATTCCCCGGAGGACGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGGCCATACAATAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTCTTTATCTACGCCAACATAAGGTACGCGGACCACTTTGTTGTCGATTTTCCAGTTGGTGCCATCAGCCGCACCTTTACCATCGGCCAGGTTTTTCGCCAGATCAAAGGTCGCTTTCGCCTGGTTGTTAGCATCGTTCAGTACGGTGCCCGCCAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGC > NC_000913/2239071‑2239569 | cTGGAATAAAATGGGGCCGGAGTCTTTTTGATAAATACCACACAGGCATTTTAATAATGTCGATTTTCCTGCACAGTTTTCCCACATTAATGAATGGATAGAATGTGGCCGGCCTTTTAAATTAACGTTATCAAGTGCCTTAACACCAGGAAAGGACTTGTTGATACCGCTCATTTCCAACAAGTATTCCCCGGAGGACGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGACCATACAATAAggg > 1:249994/1‑251 (MQ=255) ngataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagactctgctccaagcgggacaagaaaatctcttttctggtctgacggagcttactgctgaattcactgtcggagaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTAAGGGCGCAGTAAt < 1:31372‑M1/15‑1 (MQ=255) cgccggccattaccagccttgggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggcttcagatgacaaacatgatctcatatcagggacttgttcgcaccttccTAAGGGCGCAGTAATAGACTgcgc > 1:5840‑M1/228‑251 (MQ=255) ggctcgatgacttccaccatgttttgccatggcagaaactgctccatgcgggacaaggaaatatcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctaaagatgacaaacatgatctcatatcaggggcttgttcgccccttccTAAAGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGc < 1:144087‑M1/55‑1 (MQ=255) ttAATAATGTCGATTTTCCTGCACCGTTTTCCCCCATTAATGCATGGATAGAATGTGGCCGGACTTTTAAATTAACGTTATCAAGTGCCTTAACACCAGGAAAGGACTTGTTGATACCGCTCATTTCCAACAAGTATTCCCCGGAGGACGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGGCCATACAATAAGggaaggtgcgaataagcggggaaattcttctcggctgactcaggcatttca < 1:13587‑M1/250‑52 (MQ=255) gacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgctcctgccTAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTg > 1:338195‑M1/189‑250 (MQ=255) gacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTg > 1:270105‑M1/189‑250 (MQ=255) gcatcgtttTCCCCCATTAATGCATGGATAGTATGTGGCCGGACGTTTAAATTAACGTTATCCAGTGCCTTAACACCAGGAAAGGACTTGTTGATACCGCTCAGTTCCAACAAGTATTCCCCGGAGTACGGAGTCGTTGAGCTGACCATATAATTGTTCCTTGTTGGCCATACAATGAGggaaggtgcgcataagcgtagaaattcttctcggctgactcagtcatttcatttcttcatgtttgag < 1:267691‑M1/242‑68 (MQ=255) ccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgagggtcagttgatgactcatgatgaaccctgttctatggctcaagatgacaaacatgatctcatatcagggacttgttcgcaccttccTAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTCTTTATCTACGCCAACa < 1:200903‑M1/80‑1 (MQ=255) ncccaTTAATGCATGGATAGAATGTGGCCGGACTTTTAAATTAACGTTATCAAGTGCCTTAACACCAGGAAAGGACTTGTTGATACCGCTCATTTCCAACAAGTATTCCCCGGAGGACGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGGCCATACAATAAGggaaggtgcgaataagc > 1:90842‑M1/2‑168 (MQ=255) tcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTCTTTATCTACGCCAACATAAGGTACGAGGAc > 1:9354‑M1/134‑227 (MQ=255) ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttattcgcaccttccTAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGGCTTTATCTACGCCAACATAAGGTACGCGGACCACTTTGTTGTCGATTTTCCAGTTGGTGCCATCAGCCGCAcc > 1:358682‑M1/110‑245 (MQ=255) ggAAAGGACTTGTTGATACCGCTCATTTCCAACAAGTATTCCCCGGAGGACGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGGCCATACAATAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt > 1:97646‑M1/1‑101 (MQ=255) aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTCTTTATCTACGCCAACATAAGGTACGCGGACCACTTTGTTGTCGATTTTCCAGTTGGTGCCATCAGCCGCACCTTTCCCATCGGCCAGGTTTTTCGCCAg > 1:16610‑M1/89‑251 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTACGAGAGCAGAACTAGACTGCGCACCATCAGTCTTATTTCTTGCTGAATTCAGCCAGGATGTCTTTATCTCCGCCAACATAAGGTACGAGGACAACTTTGTTGTCGATTTTCCAGTTGGTGCCATCAGCCGCACCTTTACCATCGGCCAGGTTTTTCGCCAGATCAAAGGTc < 1:230145‑M1/173‑1 (MQ=255) gCTCATTTCCAACAAGTATTCCCCGGAGGACGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGGCCATACAATAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttattcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc > 1:313829‑M1/1‑81 (MQ=255) caaGTATTCCCCGGAGGACGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGGCCATACAATACGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc > 1:131367‑M1/1‑69 (MQ=255) gTATTCCCCGGAGGACGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGGACATACAATAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagactatttagaccgtttcttcgccatttaaggcgttatcccccgtttttagtgagatctctcccactgacgtatcatttggtccgc > 1:47484‑M1/1‑66 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTAAGGGCGCAGTAATAGACTGCTCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTCTTTATCTACGCCAACATAAGGTAcgcg > 1:74691‑M1/60‑150 (MQ=255) tgttctatggctccagatgacaaacangatgtcnnatnagggacttgttcgcaccttncTNNNGNNNCNGTAATNGANNGCGCCCAATNAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTCTTTATCTACGCCAACATAANGTAcgcg < 2:74691‑M1/91‑1 (MQ=255) nggaggacGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGGCCATACAATAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaac > 1:88179‑M1/2‑58 (MQ=255) ggaCGGAGTCGTTGATCTGACCATATAATTTTACCTTGGTGGCCATACAATAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt < 1:340058‑M1/129‑76 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccTAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTCTTTATCTACGCCAACATAAGGTACGCGGACCACTTTGTTGTCGATTTTCCAGTTGGTGCCATcan > 1:84969‑M1/40‑167 (MQ=255) gaacatgatctcatatcagggacttgttcgcaccttccTAAGGGCGCAGTAATAGACTGCGCCCACTCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTCTTTATCTACGACAACATAAGGTACGCGGACCACTTTGTTGTCGATTTTCCAGTTGGTGCCATCAGCCGCACCTTTACCATCGGCCAGGTTTTTCGCCAGATCCAAGGTCGCTTTCGCCTGGTTGTTAGCATCGTTCAGTACGGTGCCCg < 1:185980‑M1/213‑1 (MQ=255) cTGACCATATAATTTTACCTTGTTGGCCATACAATAAGggaaggtgcgaataagcggggcaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgcatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataac > 1:237196‑M1/1‑38 (MQ=255) gttgGCCATACAATAAGggaaggtgcnaataagnnggnaaattcttctcggctgactnagnnntnnnanttcttnatnnttgagccgantttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatntaaggcgttnnccccagtttttagtgagatctntccnncnnangttnt > 2:81288‑M1/1‑17 (MQ=255) cgcaccttccTAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTATTTATCTACGCCCACATAAGGTACGCGGACCACTTTGTTGTCGATTTTCCAGTTGGTGCCATCAGCCGCACCTTTACCATCGGCCAGGTTTTTCGCCAGATCAAAGGTCGCTTTCGCCTGGTTGTTAGCATCGTTCAGTACGGTGCCCGCCAGTGCACCGGATTTCAccagcgcc < 1:146743‑M1/239‑1 (MQ=255) gcaccttcnTNNNGNNGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTNAGAAAGGTTGTCTTTNTCNACGANAGCNTCAGGTACGCGGACCACTTTGTTGTCGATTTTCCAGTTGGTGCCATCCGCCGCACCTTTACCACCGGCCAGGTTTTTCGCCAGATc < 2:241403‑M1/166‑1 (MQ=255) gcaccttccTAAGGGCGCAGTAATAGATTGCGCCCATTCAGTCTTATTTCTTGCTGAATTCAGCCAGGGTGTCTTTATCTACGCCAACATAACGTACGCTGACCACTTTGTGGTCGATTTTCCAGTTGGTGCCATCAGCCGCACCTTTACCATCGGCCAGGTTTTTCGCCAGATc > 1:241403‑M1/10‑175 (MQ=255) gCCATACAATAAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcctttcatttcttcatgtttgagccgattttttctcacgtaaatgccttgaatcagc > 1:265846‑M1/1‑13 (MQ=255) gggCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTGGTCTTTATCTACGCCAACATAAGGTACGCGGACCACTTTGTTGTCGATTTTCCAGTTGGTGCCATCAGCCGCACCTTTCCCATCGGCCAGGTTTTTCGCCAGATCAAAGGTCGCTTTCGCCTGGTTGTTAGCATCGTTCAGTACGGTGCCCGCCAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAnc < 1:275579/251‑1 (MQ=255) | CTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACAGGCATTTTAATAATGTCGATTTTCCTGCACCGTTTTCCCCCATTAATGCATGGATAGAATGTGGCCGGACTTTTAAATTAACGTTATCAAGTGCCTTAACACCAGGAAAGGACTTGTTGATACCGCTCATTTCCAACAAGTATTCCCCGGAGGACGGAGTCGTTGAGCTGACCATATAATTTTACCTTGTTGGCCATACAATAAGGGCGCAGTAATAGACTGCGCCCAATCAGTCTTATTTCTTGCTGAATTCAGCCAGGTTGTCTTTATCTACGCCAACATAAGGTACGCGGACCACTTTGTTGTCGATTTTCCAGTTGGTGCCATCAGCCGCACCTTTACCATCGGCCAGGTTTTTCGCCAGATCAAAGGTCGCTTTCGCCTGGTTGTTAGCATCGTTCAGTACGGTGCCCGCCAGTGCACCGGATTTCACCAGCGCCAGCGCTTCTGGCAGC > NC_000913/2239071‑2239569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |