| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 255,892 | Δ18,063 bp | IS5‑mediated | gpt–[ykfC] | 26 genes gpt, frsA, crl, insB9, insA9, crl, phoE, proB, proA, thrW, ykfI, yafW, ykfH, ykfG, yafX, ykfF, ykfB, yafY, yafZ, ykfA, perR, insN, insI1, insN, eyeA, [ykfC] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 255892 | 274939–273955 | 18064–19048 | 22 [0] | [1] 3 | gpt–[insH1] | gpt,frsA,crl,insB9,insA9,crl,phoE,proB,proA,thrW,ykfI,yafW,ykfH,ykfG,yafX,ykfF,ykfB,yafY,yafZ,ykfA,perR,insN,insI1,insN,eyeA,ykfC,[insH1] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 255891 | 0 (0.000) | 22 (1.410) | 17/308 | 0.0 | 100% | intergenic (‑175/‑86) | pepD/gpt | peptidase D/xanthine‑guanine phsophoribosyltransferase |
| ? | NC_000913 | 273955 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
ACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTA > NC_000913/255657‑256130 | aCAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCCGACACGTTACGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaata > 1:169333‑M1/1‑235 (MQ=255) aGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcn < 1:44009‑M1/251‑19 (MQ=255) tttGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTGGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTGAGTAGAAAATGGTGTCAACACAAGACAGGCTGGCGAGATATGTGTGAGAATTCCTCTTTATCCCGGGTCAGGGAGAGTCAGTGCGTAAAAAGACTCGGACTCAGGTGAAATACTGTTTTTTAGgtaaggtgcgaataagcgggg < 1:161261‑M1/250‑22 (MQ=255) aaaaaTATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAAGACCTCTGTATCCCGCGTCAGGGAGAGGCAGTGCTTAAAAAGACGCGTACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattct < 1:333056‑M1/251‑29 (MQ=255) ccACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGCCGATCACCCGCCACACAGTATTGCAGGACACAGGGTTAGCAGAAAATGTTGTCAACACACGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttc > 1:199744‑M1/1‑214 (MQ=255) cGTTAAGTCTCCTTGTCGATCACCCGCAAAAAAGTATTGCCGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt > 1:297163‑M1/1‑176 (MQ=255) tctcCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc < 1:301364‑M1/237‑69 (MQ=255) gTCGATCACCCGCAAAACAGTATGGCAGGTCACAGGGGTAGCAGAAAATGTTGTAAACACAAGACAGGCGTGCGAGATATGTTTGAGAATACCGCAGTAGCCCGCGTCAGGGAGAGGCAGGGCGTAAAAAGACGCGGACGCATGTGAAATACTGGTTTTTAGggaaggtgc < 1:154438‑M1/171‑10 (MQ=255) caGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt > 1:11647‑M1/1‑130 (MQ=255) gTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGACATGTTTCAGAATACCACTTTATCCCGCGTCCGGGCGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtacatgccttgaatcagcctatttagaccgtttcttcgccat > 1:196250‑M1/1‑126 (MQ=255) gAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgct < 1:100848‑M1/242‑124 (MQ=255) gAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttcgcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc < 1:286985‑M1/251‑133 (MQ=255) cAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc > 1:293609‑M1/1‑108 (MQ=255) tgcTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGTCGCGGACTCATGTGAAATACTTGTTTTTAGggaaggtgcgaataagcggggaaattctgctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag < 1:152418‑M1/195‑101 (MQ=255) gCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatggttgagccgattttttctcccgtaaatgccttgaatctgcctatttaggccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctc < 1:172443‑M1/250‑160 (MQ=255) aTCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCAGGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctggaatcagcctatgtagaccgtgtcttcgccatttaaggcgtgagccccagtttttagtgagatctctcccactgacgtatcatttggtccgccc < 1:163008‑M1/251‑188 (MQ=255) ngcAGTGCGTAAAAAGAAGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccacagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagc > 1:103704‑M1/2‑47 (MQ=255) tAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattgtttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtg < 1:181603‑M1/190‑153 (MQ=255) aaGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccattttttagtgatatctctcccactgacgtatcattttgtccgcccgaaacaggttggccagcgtgaataacatcn < 1:73149‑M1/251‑218 (MQ=255) aGACGCGGACTCATGTGAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccaattttttctcccgtaaatgccttgaatcagcctagtgagaccgtttgttcgccatgtaaggcgttatccccagtttttattgagatctctcccactgacgtatcattggggccgcccgaaacaggttggccagcgtgaataacatcgc < 1:358162‑M1/251‑219 (MQ=255) gAAATACTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttactttatttatgtttgagccgcttttttatcccggaaatgccttgattatgcttatttagaacgtttcttcgcaatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgcataacatcgcgagatggttatcgttt > 1:240363‑M1/1‑17 (MQ=255) aCTGGTTTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtgtgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtgtcttcgccatttaaggcgttatccccagtttttagtgagatctcccccactgacgtatcatttcgtccgcccgaaacaggttggcctgcgtgaataacatcgccagttggttatcgtttttcan < 1:41295‑M1/251‑240 (MQ=255) | ACAGATTTTGGCAAAAATATCCCACAGCGGCTGTGGAGATAATTGAGACAGTTCAGACACGTTAAGTCTCCTTGTCGATCACCCGCAAAACAGTATTGCAGGTCACAGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACGCGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTA > NC_000913/255657‑256130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |