| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 554,298 | C→T | G47D (GGC→GAC) | ppiB ← | peptidyl‑prolyl cis‑trans isomerase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 554,298 | 0 | C | T | 100.0% | 19.9 / NA | 9 | G47D (GGC→GAC) | ppiB | peptidyl‑prolyl cis‑trans isomerase B |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (5/4); total (5/4) | |||||||||||
AGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCACGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTCGCGGCAGTAGTCCAGGAAGTTTTTAACTGTTTCAGGTGCTTTATCGTCAAAAGTTTTGATGACAATATCGCCGTGATTGGTGTGGAAAGTAACCATTTTTGCATCCTGTTCCGTTTGATTGGTGCTTCAACC > NC_000913/554153‑554473 | aGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCACGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGTCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTCGCGGCAGTAGTCCAGGa > 1:181539/1‑206 (MQ=255) gCCAGCGTACCACGGGAATTTTTCAGGCAGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGTCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTcgc > 1:168758/1‑157 (MQ=255) ccACGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGTCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTCGCGGCAGTAGTCCAGGAAGTTTTTAACTGTTTCAGGTGCTTTATCGTCaaaa > 1:141846/1‑198 (MQ=255) gggTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGTCGTTGATAACACGGGGGAAAATGGTGTTGTTGTAAAAACCTTCGCGGCAGTAGTCCAg > 1:429736/1‑157 (MQ=255) gCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGTCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTCGCGGCAGTAGTCCACGAAGGTTTTAACTGtt < 1:409728/160‑1 (MQ=255) ggCTTCGTTTTTGATCGGTTCTTTGGTGTCTTGTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGTCGTTGa < 1:434290/83‑1 (MQ=38) gCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGTCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTCGCGGCAGTAGTCCAGGAAGTTTTTAACTGTTTCAGGTGCTTTATCGTCAAAAGTTTTGATGACAATATCGCCGTGATTGGTGTGGAAAGTAACCATTTTTGCATCCTGTTCCGTTTGATTGGTGCTTCAAcc < 1:252699/251‑1 (MQ=255) ctgtggtggCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGTCGTTGATAACACGGTGGAAAATGGTGTTGGTGTAAAAACCTTcgc < 1:151878/99‑1 (MQ=255) gCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGTCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTCGCGGCAGTAGTCCAGGAAGTTTTTAACTGTTTCAGGTGCTTTATCGTCaa > 1:403389/1‑128 (MQ=255) | AGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCACGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTCGCGGCAGTAGTCCAGGAAGTTTTTAACTGTTTCAGGTGCTTTATCGTCAAAAGTTTTGATGACAATATCGCCGTGATTGGTGTGGAAAGTAACCATTTTTGCATCCTGTTCCGTTTGATTGGTGCTTCAACC > NC_000913/554153‑554473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |