| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 544,586 | C→T | R236H (CGT→CAT) | allC ← | allantoate amidohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 544,586 | 0 | C | T | 100.0% | 47.8 / NA | 17 | R236H (CGT→CAT) | allC | allantoate amidohydrolase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (15/2); total (15/2) | |||||||||||
CCATTTCATCGCAAATCGCCCGCATGTCGTTTTCTAACTGTTGGGTGAAATCGCGCAGCACGGCAGCGTCGGTATGACGACAATCAATGGTGAACGTGGTTTTACCCGGCACCACATTTACCGTATTCGGGCGCGGCTCTACTTTGCCAAAGGTCAGAACCAGCGGATCGCCCATCCTTTTCGCTTTTTCGACCGACTGATGGCAAATGCGACTGAAAGCGTAAACTGTATCACGACGATAACCCATCGGCGTGGTGCCTGCATGGTTTGATTCGCCGTTCAGCGTTACCGTATAACGACGCTGCCCGACAATTGCATTCACCACGCCAATTGATTGCCCATTACTTTCCAGCACACAGCCCTGTTCAATATGCAGTTCAACAAAGGCTTTAATATCCTGACGCGGAGTTAGTGGGGCGTTCGGAAGAGTAAATCCGCAAGCCTTCATCG > NC_000913/544353‑544802 | ccATTTCATCGCAAATCGCCCGCATGTCGTTTTCTAACTGTTGGGTGAAATCGCGCAGCACGGCAGCGTCGGTATGAAGACAATCAATGGTGAACGAGGTTTTACCCGGCACCACATTTACCGTATTCGGGCGCGGCTCTACTTTGCCAAAGGTCAGACCCAGCAGATCGCCCATCCTTTTCGCTTTTTCGACCGACTGATGGCAAATGCGACTGAAAGCGTCAACTGTATCATGACGATAACCCATCGGc > 1:242903/1‑251 (MQ=255) gTTTTCTAACTGTTGGGTGAAATCGAGCAGCACGGCAGCGTCGGTATGACGACAATCAATGGTGAACGTGGTTTTACCAGGCACACCATTTACCGTCTTCGGGCGGGGCTCTAATTTGCCAAAGGTCAGCACCAGCGGATCGCCCATCACTTTCGCTTTTTCGCCCGACTGATGGCAAATGCGACTGAAAGCGTAAACTGTATCATGACGATAAACCATCGGCGTGGTGCCTGCATGGGTTGCTTCGCCGt > 1:223532/1‑251 (MQ=255) cTAACTGTTGGGTGAAATCGCGCAGCACGGCAGCGTCGGAATGACGACAATCAATGGTGAACGTGGTTTTACCCGGCACCACATTTACCGTATTCGGGCGCGGCTCTACTTTGCCAAAGGTCAGAACCAGCGGATCGCCCATCCTTTTTGCTTTTTCGACCGACTGATGGCAAATGCGACTGAAAGCGTAAACTGTATCATGACGATAACCCATCGGCGTGGTGCCTGCATGGTTTGAt > 1:500911/1‑239 (MQ=255) gCGTCGGTATGACGACAATCAATGGTGAACGTGGTTTTACCCGGCACCACATTTACCCTCTTCGGCCGCGGCTCTACTTTGCCAACGGTCAGCCCCAGCGGATCGCCCCTCCTTTTCGCTTTTTCGACCGACTGATGGCAAATGCGACCGAAAGCGTAAACTGTATCCTGACGATAACCCATCGGCGTGGTGCCTGCATGGTTTGATTCGCAGTTc > 1:507519/1‑216 (MQ=255) caatcaatGGTGAACGTGGTTTTACCCGGCACCACATTTACCGTATTCGGGCGCGGCTCTACTTTGCCAAAGGTCAGAACCAGCGGATCGCCCATCCTTTTCGCTTTTTCGACCGACTGATGGCAAATGCGACTGAAAGCGTAAACTGTATCATGACGATAACCCATCGGCGTGGTGCCTGCATGGTTTGATTCGACGTTCAGCGTTACCGTATAACGACGCTGCCCGACAATTGCATTCACCACGCCAat > 1:485180/1‑251 (MQ=255) tGGTTTTACCCGGCAACACATTTACCGTATTCGGGCGAGCCTCTACTTTTCCAAAGGCCAGAACCAGCGGAAAGCACATCCTTTTCGCATTTTCGAACGACTGATGGCAAATGCGACTGAAAGAGTAACCTGTATCATGAAGATAACCCATCGGCGCGGTGCCTGCATGGTTTTATTCGCCGTTCAGCGTTACCGTATAACGACGCTGCCCGACAATTGCATTcaccaag > 1:288183/1‑228 (MQ=255) cgGCTCTACTTTGCCAAAGGTCAGAACCAGCGNATCGCCCATNNTTNTCGCGNTNNNGNNNGANTGATGGCAAATGTGACTGANAGNNTAAACTNTATCATGACGATAACCCATCGGCgtg < 2:113761/121‑1 (MQ=255) cgGCTCTACTTTGCCAAAGGTCAGAACCAGCGAATCGCCCATCCTTTTCGCTTTTTCGACCGACTGATGGCAAATGTGACTGAAAGCGTAAACTGTATCATGACGATAACCCATCGGCgtg > 1:113761/1‑121 (MQ=255) gCTCTACTTTGCCAAAGGTCAGAACCAGCGGATCGCCCATCCTTTTCGCTTTTTCGACCGACTGATGGCAAATGCGACTGAAAGCGTAAACTGTATCATGACGATAACCCATCGGCGTGGTGCCTGCCTGGTTTGATTCGCCGTTCAGCGTTACCGTATAACGACGCTGCCCGACAATTGCATTCACCACGCCAATTGATTGCACATTACTTTCCAg > 1:441508/1‑217 (MQ=255) ccAAAGGTCAGCACCAGCGGATCGCCCATCCTTTTCGCTTTTTCGACCGACTGCTGGCAAATGCGACTGAAAGCGTACACTGTATCATGACGATAACCCATCGGCGTGGTGCCTGCATGGTTTGATTCGCCGTTCAGCGTTACCGTATACCGACGCTGCCCGACAATTGCCTTCACCCCGCCAATTGATTGCCCATTACTTTCCAGCACACCGCCCTGTTCAATATGCAGTTCAACAAAGGCtt > 1:211946/1‑244 (MQ=255) gCTTTTTCGACCGACTGATGGCAAATGCGACTGAAAGCGTAAACTGTATCATGACGCTAACCCCTCGGCGTGGCGCCTGCATGGTTTGCTTCGCCGTTCAGCGTTACCGAATACCGACGCTGCCCGACAAtt > 1:281364/1‑132 (MQ=255) cTTTTTCGACCGACTGATGGCAAATGCGACTGAAAGCGTAAACTGTATCATGACGATAACCCATCGGCGTGGTGCCTGCATGGTTTGATTCGCCGTTCAGCGTGACCGTATAACGACGCTGCCCGACAATTGGATTCACCACGCCAAGTGATTGCCCATTACGTTCCAGCACACAGCCCGGTTCAATATGCAGTTCAACAAAGGCTTTAATATCCTGACGCGGAGttgg < 1:466426/229‑3 (MQ=255) cgaccgacTGATGGCAAATGCGACTGAAAGCGTAAACTGTATCATGACGATAACCCATCGGCGTGGTGCCTGCATGGTTTGATTCGcc > 1:495332/1‑88 (MQ=255) gCAAATGCGACTGAAAGCGTAAACTGTATCATGACGATAACCCATTGGCGTGGTGCCTGCATGGTTTGCTTCGCCGTTCAGAGTTACCGTATACCGACGATGCCCGACAATTGCATTCACCACGCCAATTGATTGCCCATTACTTTCCAGCACACAGCCCTGTTCAATATGCAGTTCCACAAAGGCTTTAATATCCTGACGCGGAGTTAGTGGGGCGTTCGGAAGAGTAAATCCGCAAGCCTTcatcg > 1:271061/1‑248 (MQ=255) gCAAATGCGACTGAAAGCGTAAACTGTATCATGACGATAACCCATCGGCGTGGTCCCTGCCTGGTTTGCTTCGACGTTCAGCGTTACCGTATAACGACGCTGCCAGACAATTGAATTcacccc > 1:479118/1‑121 (MQ=255) naCTGAAAGCGTAAACTGTATCATGACGATAACCCATCGGCgtggt > 1:128258/2‑46 (MQ=255) tATCATGACGATAACCCATCGGCGTGGTGCCTGCCTGGTTTGATTCGCCGTTCAGCGTTACCGTATAACGACGCTGCCCGACAATTGCATTCACCACGCCCATTGATTGCCCATTACTTTCCCGCACACAGCCCTGTTCAATATGCAGTTCAACAAAGGCTTTAATATCCTGACGCggcg > 1:190835/1‑178 (MQ=255) | CCATTTCATCGCAAATCGCCCGCATGTCGTTTTCTAACTGTTGGGTGAAATCGCGCAGCACGGCAGCGTCGGTATGACGACAATCAATGGTGAACGTGGTTTTACCCGGCACCACATTTACCGTATTCGGGCGCGGCTCTACTTTGCCAAAGGTCAGAACCAGCGGATCGCCCATCCTTTTCGCTTTTTCGACCGACTGATGGCAAATGCGACTGAAAGCGTAAACTGTATCACGACGATAACCCATCGGCGTGGTGCCTGCATGGTTTGATTCGCCGTTCAGCGTTACCGTATAACGACGCTGCCCGACAATTGCATTCACCACGCCAATTGATTGCCCATTACTTTCCAGCACACAGCCCTGTTCAATATGCAGTTCAACAAAGGCTTTAATATCCTGACGCGGAGTTAGTGGGGCGTTCGGAAGAGTAAATCCGCAAGCCTTCATCG > NC_000913/544353‑544802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |