| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,629,431 | G→A | T364T (ACC→ACT) | ettA ← | energy‑dependent translational throttle protein EttA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,629,431 | 0 | G | A | 95.5% | 57.1 / NA | 22 | T364T (ACC→ACT) | ettA | energy‑dependent translational throttle protein EttA |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (9/12); total (9/13) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGCATCTCGGTGTTGCCGATCTTCATGATATCCAGCCCGCCGGAAACTTCTTCCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCAGGTGGAATAAACAGTTCGTTGGTTTCGTTACGTTTCTGATATTCGGTGCTGTTCAGTTCTTCAAAGCGCGCCAGACGTGCTTTACCTTTCG > NC_000913/4629184‑4629669 | cGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGCATCTCGGTGTTGCCGATCTTCATGATATCCAGCCCGCCGGAAACTTCTTCCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTc < 1:20761/251‑1 (MQ=255) ncccTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGCATCTCGGTGTTGCCGATCTTCATGATATCCAGCCCGCCGGAAACTTCTTCCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCcg > 1:317005/2‑251 (MQ=255) cTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGCATCTCGGTGTTGCCGATATTCATGTTTTCCAGCCCGCCGGAAACTTCTTCCCAAACGGTTTTGCTGTTATCAATTGAGTCACGGAACTGCTCAAGCGACGCAAGTTTCACCGTTTCACCCAAAGTGATGGTGCCACTATCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTCCCCGCa > 1:288229/1‑227 (MQ=255) ggCGCGGCTTGGCATCTCGGTGTTGCCGATCTTCATGATATCCAGCCCGCCGGAAACTTCTTCCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTc < 1:163509/190‑1 (MQ=255) cTTGGCATCTCGGTGTTGCCGCTCTTCATGATATCCAGCCCGCCGGAAACTTCTTCCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGACCgaga > 1:192259/1‑241 (MQ=255) tCATGATATCCAGCCCGCCGGAAACTTCTGCCCAAACGGTTTTGCTGTTATCCATTGAGTCGCGGAACTGATCAACCGACGCCAGTGTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCATAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATcn < 1:101557/245‑2 (MQ=255) ntCCAGCCCGCCGGAAACTTCTTCCCAAAAGGATTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCCCCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGc > 1:404177/2‑212 (MQ=255) tCCAGCCCGCCGGAAACTTCTTCCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCCTACGGAACAGAGTCGCTTTACCCGCACCGTTCGGACCGCTGAGCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGAAGACGATCGCCATAGGATTTACg > 1:407745/1‑251 (MQ=255) tcttcCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCATCAGACGATCGCCATAGGATTTACGCAGGTTGCTGan < 1:125712/245‑2 (MQ=255) aCGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGAGCCCGACGATCGCTCCTTTGGGGAGCGAGATGCTCAGGTCTTCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATc < 1:271351/251‑1 (MQ=255) tGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCGGTTCCTGACCAGAGATCATACGGAACAGAGTCGAt < 1:211307/119‑1 (MQ=255) nnaGNNNNNGAANTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTc < 2:317005/144‑1 (MQ=255) cACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGGCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAAGCAGCAGACGATCGCCATAGCATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAg < 1:493522/232‑1 (MQ=255) cGGAACTGATCAACCGACGCCAGTTTCCCCGTTTCACCCAAAGTGATGGCGCCGCTGTCAGGCGGTTCCTGACCAGAGATAATACGGAACAGAGTCGATTTACCCGCAACGTTAGGACCGACGATCCCGACGAta > 1:265931/1‑134 (MQ=255) cGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGTTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCAGGTGGAATaa > 1:408539/1‑250 (MQ=255) gATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGTCCAGAGATCAGACGGAACAGGGTCGATTTACCCGCACCTATCGGACCGATGATCCCGACGATCGCTCCTTCCGGTTTCGAGAATCTCACGTCATCAAGCAGCAGACGATCTCCATAGGATTTGCGCAGGTTTCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCAGGTGGAATAAACAGtt < 1:293954/249‑1 (MQ=255) gCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATcagc > 1:73160/1‑156 (MQ=255) gtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGGTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATGGAGAAGCTCAGGTCTTCAAGCAGCAGACGATCGCCATAGGAGTTACTCAGGTTGCTGAGTTCCAGCACTTTATCGCCCAGACGCGGTCCAGGTGGAATAAACAGTTCGTTGGTTTCGTTACGTTTCTGata < 1:503442/251‑1 (MQ=255) accCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCAGCAATCAGCAGACGAGCGCTATAGGATGTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCAGGTGGAATAAACAGTTCGTTGGTTTCGTTACGTTTCTGATATTCgg < 1:338055/251‑1 (MQ=255) gCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCAGGtn < 1:130272/191‑2 (MQ=255) agagATCATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGCGAAGCTCAGGTCATCAATCAGCAGCCGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCAGGTGGAATAAACAGt > 1:455981/1‑181 (MQ=255) cATACGGAACAGAGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCAGGTGGAATAAACAGTTCGTTGGTTTCGTTACGTTTCTGATATTCGGTGCTGTTCAGTTCTTCAAAGCGCGCCAGACGTGCTTTACCTTTCg < 1:265183/251‑1 (MQ=255) | CGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGCATCTCGGTGTTGCCGATCTTCATGATATCCAGCCCGCCGGAAACTTCTTCCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGGTCATCAATCAGCAGACGATCGCCATAGGATTTACGCAGGTTGCTGACTTCCAGCACTTTATCGCCCAGACGCGGTCCAGGTGGAATAAACAGTTCGTTGGTTTCGTTACGTTTCTGATATTCGGTGCTGTTCAGTTCTTCAAAGCGCGCCAGACGTGCTTTACCTTTCG > NC_000913/4629184‑4629669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |