| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,447,298 | G→A | G1063S (GGT→AGT) | tamB → | translocation and assembly module subunit TamB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,447,298 | 0 | G | A | 100.0% | 45.5 / NA | 17 | G1063S (GGT→AGT) | tamB | translocation and assembly module subunit TamB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/8); total (9/8) | |||||||||||
GGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGGGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATCTGATTGTGCGTAAAGGTGAGTTACTGTTCTCTGGTCCGCCAGATCAACCGTATCTTAATATTGAAGCTATTCGTAACCCGGATGCTACAGAAGACGACGTAATCGCCGGAGTTCGCGTCACTGGTCTGGCGGACGAACCGAAAGCGGAGATCTTCTC > NC_000913/4447102‑4447512 | ggAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAgg > 1:490485/1‑251 (MQ=255)ggAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAgg > 1:490507/1‑251 (MQ=255)ggAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAAGGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGGCGTTCAGGACAAACAAGGGCGGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAgg < 1:461962/251‑1 (MQ=255) aaGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATc < 1:199162/251‑1 (MQ=255) aaCCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATCTGATTGTGCGTAAAGGTGAGTTACTGTTCTCTGGTCCGCCNg < 1:395155/250‑1 (MQ=255) cGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCTCGTTGGCAACAATGTTCGCATTGACGCCTTTGGCCTGAAAGCGCGGCGGACTGGCGATCTCAATGTCGTGCTTGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATg < 1:442592/183‑1 (MQ=255) gCGTCGCTTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTc > 1:107832/1‑162 (MQ=255) gCGTCGATNNCGATTAACANTAACCTGATTGTCCACGTTGGCAACAATGTGCGCAGTGACGCCTTTGGCCTGANAGCGCGGCTNNCGNGCGATNTNNNTNNNGTNCAGGACAAACAAGGGCTGANTCNNAACGGGNAGATCAACATCCCTGAAGGGCGCTTc < 2:107832/162‑1 (MQ=255) ccGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATCTGATTGTGCGTAAAGGTGAGTTACTGTTCTCTGGTCCGCCAGATCAACCGTATCTTAATATTGAAGCTATTCGTAAccc > 1:496644/1‑251 (MQ=255) cctgatttgccgcgtggggaataaTGTTCGCATGAACGCCTTTGTCCTGAAAGCGCGGCTGACGGGCGAGCTCAATGGCGTGCAGGACAACCAAGGGCTGATTCTGAACGGGCAGAGCAACACCCCTGTAGTGCGCTTCTATGCTTATGGTCATGATCTGATTGTGTGTAAAGGTGTGTTACTGTTCTCTGGTCCTCCAGAGCAACCGTATCTTAATATTGAAGCTATTCGTAACCCGGAGGCTACagaag < 1:382662/229‑1 (MQ=255) cgcgGCTGACGGGCGATCTCAATGTCATTCAGGACAAACAAGGGCTGAGTCTGAAAGGGAAGATCAACATCCCTGAAGGGAGATTCCATGCCTATGGTCAGGATCTGATTGTGCGTAAAGGTGAGTTACTGTTCTATGGTCCGCCAGATCAACCGTATCTTAATATTGAAGCTATTCGTAACCCGGATGCTACAGAAGACGACGTAATCGCCGGAGTTCGCGTCACTGGTCTGGCGGACGAACCGAAAGCg > 1:348621/1‑251 (MQ=255) cgGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGAtn < 1:309294/103‑2 (MQ=255) cgGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATc > 2:309294/1‑103 (MQ=255) naCGGGCGATCTCAATGTAGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGAACTGATTGTGCGTAAAGGTGAGTTACTGTTCTCTGGTCCGCCAGATCAACCGTATCTTAATATTGAAGCTATTCGTAACCCGGATGCTACAGAAGACGACGTAATCGCCGGAGTTCGCGTCACTGGTCTGGCGGACGAACCGAAAGCGGAGAtct > 1:150025/2‑251 (MQ=255) ngCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATCTGATTGTGCGTAAAGGTGAGTTACTGTTCTCTGGTCCGCCAGATCAACCGTATCTTAATATTGAAGCTATTCGTAACCCGGATGCTACAGAAGACGACGTAATCGCCGGAGTTCGCGTCACTGGTCTGGCGGACGAACCGAAAGCGGAGATCTtctc > 1:150641/2‑251 (MQ=255) cGATCTCAATGTCGTTCAGGCCAAACATGGGCTGAGCCTGAACGGGCAGATCCCCATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATCTGATTGTGCGTCAAGGTGAGTTACTGTTCTCTGGTCCGCCAGATCa > 1:411739/1‑138 (MQ=255) caaacaaTGGCTGAGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGAGCTGATTGTGCGTAAAGGTGAGTTACTGTTCTCTGGTCCGCCAGATCAACCGTATCTTAATATTGAAGc < 1:86636/138‑1 (MQ=255) | GGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGGGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATCTGATTGTGCGTAAAGGTGAGTTACTGTTCTCTGGTCCGCCAGATCAACCGTATCTTAATATTGAAGCTATTCGTAACCCGGATGCTACAGAAGACGACGTAATCGCCGGAGTTCGCGTCACTGGTCTGGCGGACGAACCGAAAGCGGAGATCTTCTC > NC_000913/4447102‑4447512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |