| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,223,638 | T→C | intergenic (‑10/‑190) | iclR ← / → metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,223,638 | 0 | T | C | 100.0% | 46.4 / NA | 18 | intergenic (‑10/‑190) | iclR/metH | DNA‑binding transcriptional repressor IclR/cobalamin‑dependent methionine synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/12); total (6/12) | |||||||||||
CGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAAC > NC_000913/4223444‑4223849 | cGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCGCGGGTTAAAGACTGAACCTGTCCAGTCGCTGTTGCGGTGGCAACGGCGGGTTTTCTGCCCCGTTTCTCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAtcattttca < 1:249786/223‑1 (MQ=255) ggAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCACTCCACTCCAGTAATTTCAGGCCACGCGTTACAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTT‑CTGCCCCGATTTGCGGGGATGGGCGGGAGCATGACAGTCTCCTTTTTCTGTCTCAGGGAAAACTTTTTTATTTTTATTTTTTGGTAATGCAATAGTTATTTGACTGATcc > 1:329440/1‑251 (MQ=255) ggactttCAGGCCACGCGTTAAAGACTGAACCTGTCCAGACGCAGGTGCGGTGGCAACGGCGGCTTTGCAGCCGCGTGCCGCGGCAATGGGTGCGTCCACGACAGGCTCCTTTTTCTGTATCGTGAAAGTCATTTGCATTTTTATTGTTAGCTAATGCAATAGTTac < 1:188420/163‑1 (MQ=255) ggCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCCTTTTTATTGTTTGCTAATGCAATAGTTACTGAACTTATCCGATGAGTTAATGTTTAAAAAATCTCATGTTTCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGTTttgttgt > 1:118009/1‑250 (MQ=255) aGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGGTTTTTGTCGCGTTTTGCGGGCAAGGGCGCGACCATTACAATATCCTTTTTCTCTATCGTGGAAATAATTTTCATTTTTATTGTTAGCTACTGCAATAGTTACTGAACTGATCCGATGCGTTACTGTTGaa > 1:284185/1‑173 (MQ=255) tCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGGCCATGACAGTCTCCTGTTTCTGTATCGTGGAAAGCATTTGCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGACCCGATGAGTTAATTTTGAACAAGTCGCATGTTGCGTGGTGGTTGCTTTTTCCACAGATGCGTTTATGCCAGTATGGTTTGTTGa < 1:234372/226‑1 (MQ=255) ccAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGTGTTGAGCgg < 1:145919/251‑2 (MQ=255) nnnnnggTNGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGtt < 2:298182/137‑1 (MQ=255) ggCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTAGTAAATCTGGGTTGAGCGTGTCGGGAGCAAGtgtg < 1:144049/250‑1 (MQ=255) ggcggGTTTTCTGCCGCGTGTCGCGGGAATGGTTGCGACCATGACAGTCTCCTTTGTCTGTAGCGTGGAAATCATTTTCATTTTTACTGTTAGCTAATGCAATAGTTACTGATCTGATCCTATGAGTTAATGGTGAACAAATCTCATGTTGCGTGGGGTTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGtt < 1:331789/196‑1 (MQ=255) tttCTGCCGCGTTTCGCGTGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCAGTTTTATGGTTAGCTAATGCAATAGTTACGGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTAGTCGCTTTTACCACACATGCGTTTAGGCCAGTAGGGTGTGTTGAACTGTTATTAAATCTGGGTTGAGCGCGTCGGGAGCAAGTGTGAGCAGCAAAGTgg < 1:498809/250‑1 (MQ=255) tCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTGCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTTCCACATATGCGGTGATTCCAGTATGGTTTGTTGTATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGaa < 1:211344/250‑1 (MQ=255) gCCGCGTTTCGCGGGAATGGGTGCGCCCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGATAATGCAATAGTTACTGAACTGATCCGGTGCGTTAATGTTAAAAAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGATGAATTTTTATTAAATCTGGGTTGAGCGGGTCGGGGGCAAGTGGGGGGAGCAAAGTGGaacaac > 1:458546/1‑251 (MQ=255) ccGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAAtcattttc < 1:399118/66‑1 (MQ=255) gctgtaaTGGGTGCGACCATGACAGTCTTCGTTTGCTTGATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATcc < 1:499013/93‑1 (MQ=255) cgGGAATGGGTGCGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGaaca > 1:36140/1‑238 (MQ=255) cGACCATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTTCGTGGTGGTCGCTTTTAcc < 1:152658/135‑1 (MQ=255) nccATGACAGTCTCCTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGttt > 1:406346/2‑145 (MQ=255) | CGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTATTAAATCTGGGTTGAGCGTGTCGGGAGCAAGTGTGAGCAGCAAAGTGGAACAAC > NC_000913/4223444‑4223849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |