Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,114,090	C→T	G128D (GGT→GAT)	fpr ←	flavodoxin/ferredoxin‑NADP(+) reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,114,090	0	C	T	100.0%	46.2 / NA	18	G128D (GGT→GAT)	fpr	flavodoxin/ferredoxin‑NADP(+) reductase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (9/9);  total (9/9)

CTTTATTCATCGGCAGGCCAATCGTGCTTTCCAGTTCCCCACTTTCAATTAATGCCGGTATCCGTCCGGTGAGCGACCCCGCTGCCGTTTCCCGACTGACCACCGTCTGAATGCGCAGTTTTCCTTCGTAGCGTTTTTCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTACCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACAT  >  NC_000913/4113860‑4114312                                                                                                                                                                                                                                       |                                                                                                                                                                                                                               cTTTATTCATCGGCAGGCCAATCGTGCTTTCCAGTTTACCACTTTCAATTAATGCCGGTATCCGGCCGGTGAGCGACCCCGCTGCCGTTTCCCGACTGACCCCCGTCTGAATGCGCAATTTTCCTTCGTAGCGTTTTTCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAAAGTGCGGCGGTCACCCGGACCCGCTTTTTGAAGCGATCTAAATCTTTCTCTAGTTGCAGAATCGataa                                                                                                                                                                                                             >  1:243640/1‑250 (MQ=255)                                               aaTTAATGCCTGTCCCCGCCCGGTGACCCACCCCGCGGCCGTTTCCCGACTGACCACCGTCTGAATGCCCAGCTTTCCGTCGTTGCGTCTTTCCAGCTCCTGCACCAGTAGCAAATAAATGAAGTCGGCAACATAACGTGCAGCGAGCACCAAGACCAGATTTTTTAAGCGAACTAAATCTGTATCTAGGTGTAAAAGCGATAAATAAGGACCAATCGCTGTACCTGTTGCCAGCATCCATATCGTTTCGc                                                                                                                                                              <  1:458212/251‑1 (MQ=255)                                                                               ncGCTGCCGTTTCCCGACTGACCACCGTCTGAATGCGCAGTTTTCCTTCGTAGCGTTTTTCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCt                                                                                                                              >  1:122779/2‑251 (MQ=255)                                                                                             ngACTGACCACCGTCTGAATGCGCAGTTTTCCTTCGTAGCGTTTTTCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGCTTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAG‑ATCCATAGCGTTTCGCAGTGCGGCa                                                                                                                                                     >  1:99084/2‑213 (MQ=255)                                                                                                    ccaccGTCTGAATGCGCAGTTTTCCTTCGTAGCGTTTTTCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGc                                                                                                                                                      <  1:367423/206‑1 (MQ=255)                                                                                                    ccaccGTCTGAATGCGCAGTTTTCCTTCGTAGCGTTTTTCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGc                                                                                                                                                      <  1:367407/206‑1 (MQ=255)                                                                                                    ccaccGTCTGAATGCGCAGTTTTCATTCGTAGAGTTTTTCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTAGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATc                                                                                                                                                                                                                  >  1:407096/1‑146 (MQ=255)                                                                                                                          tCCTTCGTAGCGTTTTTCCAGTTCCTGCATCAGAGGCAAATAGCTTAAGTCGGCGGAATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCATAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCAAGCATCCATAGCGTTTCTCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTg                                                                                   >  1:917/1‑251 (MQ=255)                                                                                                                           ccTTCGTAGCGTTTTTCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAGTCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTg                                                                                   <  1:500260/250‑1 (MQ=255)                                                                                                                                         ttCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTggg                                                                     <  1:426681/250‑1 (MQ=255)                                                                                                                                                    gCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGcn                                                          <  1:124620/250‑2 (MQ=255)                                                                                                                                                                    gCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGATGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGCCATCGGGGACGGTGAcc                                          >  1:167710/1‑250 (MQ=255)                                                                                                                                                                                 gcATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAg                                                                                                                                                                               >  1:134241/1‑104 (MQ=255)                                                                                                                                                                                 gcATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTc                                                                                                                                                                <  1:338242/119‑1 (MQ=255)                                                                                                                                                                                                  cACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCgn                                                                                               <  1:57570/167‑2 (MQ=255)                                                                                                                                                                                                          ncAGATTTTTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCggg                      >  1:92246/2‑232 (MQ=255)                                                                                                                                                                                                           cAGATTTGTGAAGCGATCTAAATCTTTATCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGATCACAAAGAATCCTGCCGCTTCGCTAac                                                                                                                <  1:408478/141‑1 (MQ=255)                                                                                                                                                                                                             gATTTTTGAAGAGATCTAAATCTATATCTAGTTGCAGAATCGATAAATAAGGGCCAAGCGCTGTACCGGTTGCCAGCATACATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCAAGTCGTGGGCTTAATTTGACATCGGGGACGGTGACCAGGTAAAACTCCAGAGCGGGATTATCGGGCGAGATTACAt  >  1:34721/1‑249 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                               CTTTATTCATCGGCAGGCCAATCGTGCTTTCCAGTTCCCCACTTTCAATTAATGCCGGTATCCGTCCGGTGAGCGACCCCGCTGCCGTTTCCCGACTGACCACCGTCTGAATGCGCAGTTTTCCTTCGTAGCGTTTTTCCAGTTCCTGCATCAGTGGCAAATAGCTTAAGTCGGCGGCATAACGTGCGGCGTGCACCAGGACCAGATTTTTGAAGCGATCTAAATCTTTACCTAGTTGCAGAATCGATAAATAAGGGCCAATCGCTGTACCGGTTGCCAGCATCCATAGCGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACAT  >  NC_000913/4113860‑4114312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑