| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,915,155 | C→T | G16S (GGC→AGC) | glmU ← | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,915,155 | 0 | C | T | 100.0% | 40.4 / NA | 16 | G16S (GGC→AGC) | glmU | fused N‑acetylglucosamine‑1‑phosphate uridyltransferase and glucosamine‑1‑phosphate acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (12/4); total (12/4) | |||||||||||
CCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCTTTCAGCGCCTGTTTTAGCAGATCGCCGCCGTGACCGTACACCAGGTGAACGTGCGCTGCGCCTAATTCATTCGCAGCATCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCCTTTGCCTGCGGCAAGGATCACTACGCTCATAGCATTATTCAACATACGCGTCCTGACTGTAATTTGAGAACGAATTTAAACCGCTTCACCTTGAAAAAACTACATTTTTTTCATCGTGAAATGGACAGAGGATAAATTGTTCAATAACGGATTATCCCCGCTGACGAAAGCGCCATTTTCGACCATCGTCACGCCTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGG > NC_000913/3914953‑3915399 | cccGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCTTTCAGCGCCTGTTTTAGCAGATCGCCGCCGTGACCGTACACCAGGTGAACGTGCGCTGCGCCTAATTCATTCGCAGCATCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCttttn < 1:300620/207‑2 (MQ=255) nttAAGGTTGTCGTCTTTCAGCGCCTGTTTTAGCAGATCGCCGCCGTGACCGTACACCAGGTGCACGTGCGCTGCGCCTAATTCATTCGCAGCATCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTg > 1:127536/2‑175 (MQ=255) cgggACCGTACACCAGGTGAACGTGCGCTGCGCCTAATTCATTCGCAGCATCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTGCCTGCGGCAAGGATCACTACGCTCATAGCATTATTCAACATACGCGTCCTGACTGTAATTTGAGAACGAATTTAAACCGCTTCTCCTTGAAAAAACTACATTTTTTTCATCGTGAAATgg < 1:151756/248‑1 (MQ=255) gTACACCAGGCGAACGTGCGCTGCGCCTAATTCATTCGCAGCATCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTg > 1:425837/1‑124 (MQ=255) ccAGGTGAACGTGCGCTGCGCCTAAGTCATTCGCAGCATCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTGCCTGCGGCAAGGATCACTACGCTCATAg < 1:261241/147‑1 (MQ=255) ctcagcaTCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGCCGATCGGAATACATGCGCGTGCTTTTGCCTGCGGCAAGGATCACTACGCTCATAGCATTATTCACCATACGCGTCCTGACTGTAATTTGAGAACGCATTTAAACCGCTTCACCTTGAAAAAACTACATTTTTTTCATCGTGAAATGGa > 1:480323/3‑209 (MQ=255) cGCAGCATCAATTACANGCTNAACCNTCNCTTTCCCGGCAATGGNATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTGCNNGNNNCNAGGATCAc < 2:357153/105‑1 (MQ=255) cGCAGCATCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTGcc < 1:6675/90‑1 (MQ=255) cGCAGCATCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTGCCTGCGGCAAGGATCAc > 1:357153/1‑105 (MQ=255) cGCAGCATCAATGACATGCTGAACCATCGCTGTCCCGGCACGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTgnn > 2:6675/1‑88 (MQ=255) tCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACCTGCGCGTGCTTTTGCCTGCGGCAAGGATAACTACGCTCATAGCATTCTTCAACATACGCGTCATGACTGTAATTTGAGACCGACTTTAAACCGCTTCACCTTGAAAAAACTACATTTTTTTCATCGTGAAATGGACAGAGGATAAATTGTTCAATAACGGATTATCCCCGCTGACGAAAGCGCCCTTTTCGACCATCGTCACGCCtttt > 1:484105/1‑251 (MQ=255) cccGGCAAGGGTATGCAGCACTTTCGGACGATCGGAGTACATGCGCGTGCTTTTGCCTGCGGCATGGCTCACTGCGCTCATAGCCTTATTCATCATACGCGTCCTGCCTGTAATTTGTGAACGAATTTCAACCGCTTCACCTTGAAAAAACTACATTTTTTTCATCGTGAAATGGACAGAGGATACATTGTTCAATAACGGATTATCCCCGCTGACGCAAGCGCCATTTTCGACCATCGTCACGCCTTTTg > 1:471942/1‑251 (MQ=255) ccGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTGCCTGCGGCAAGGATCACTACGCTCATAGCATTATTCAACATACGCGTCCTGACTGTAATTTGAGAACGAATTTAAACCGCTTCACCTTGAAAAAACTACATTTTTTTCATCGTGAAATGGACAGAGGATAAATTGTTCAATAACGGATTATCCCCGCTGACGAAAGCGCCATTTTCGACCATCGTCACGCCTTTTGt > 1:350504/1‑251 (MQ=255) gCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCTTTTGCCTGCGGCACGGCTCACTACGCTCATAGCATTATTCAACATAAGCGTcc > 1:498468/1‑100 (MQ=255) aTCGGAATACATGCGCGTGCTTTTGCCTGCGGCCAGGATCACTACGCTCATAGCATTATTCAACATACGCGTCCTGACTGTAATTTGAGAACGAATTTAAACCGCTTCACCTTGAAAAAACTACATTTTTTTCATCGTGAAATGGACAGAGGATAAATTGTTCAATAACGGATTATCCCCGCTGCCGAAAGCGCCATTTTCGACAATCGTCACGCCTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAAtt > 1:154433/1‑251 (MQ=255) ngAATACATGCGCGTGCTTTTGCCTGCGGCAAGGATCACTACGCTCATAGCATTATTCAACATACGCGTCCTGACTGTAATTTGAGAACGAATT‑AAACCGCTTCCCCTTGAAAAAACTACATTTTTTTCATCGTGAAATGGACAGAGGATAAATTGTTCAATTACGGATTATCCCCGCCGACGAAAGCGCCATTTTCGACCATCGTCACGCCTTT‑GTCTTCCGAAAATTAAGGCAGTACCTTAATTTAAGc > 1:310195/2‑251 (MQ=255) gcgTGCTTTTGACTGCGGCAAGGAACACTACGCTCATAGCATTATTCAACATACGCGTCCTGACTGTAATTTGAGAACGCATTTAAACCGCTTCACCTTGAAAAAACTACATTTTTTTCATCGTGAAATGGACAGAGGATAAATTGTTCAATAACGGATTATCCCCCCTGACGAAAGCGCCATTTTCGACCATCGTCACGCCTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAggggg > 1:151905/1‑248 (MQ=255) | CCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCTTTCAGCGCCTGTTTTAGCAGATCGCCGCCGTGACCGTACACCAGGTGAACGTGCGCTGCGCCTAATTCATTCGCAGCATCAATGACATGCTGAACCATCGCTTTCCCGGCAAGGGTATGCAGCACTTTCGGAAGATCGGAATACATGCGCGTGCCTTTGCCTGCGGCAAGGATCACTACGCTCATAGCATTATTCAACATACGCGTCCTGACTGTAATTTGAGAACGAATTTAAACCGCTTCACCTTGAAAAAACTACATTTTTTTCATCGTGAAATGGACAGAGGATAAATTGTTCAATAACGGATTATCCCCGCTGACGAAAGCGCCATTTTCGACCATCGTCACGCCTTTTGTCTGCAGAAAATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGG > NC_000913/3914953‑3915399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |