| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,513,409 | C→T | S77N (AGC→AAC) | trpS ← | tryptophan‑‑tRNA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,513,409 | 0 | C | T | 100.0% | 57.0 / NA | 20 | S77N (AGC→AAC) | trpS | tryptophan‑‑tRNA ligase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (9/11); total (9/11) | |||||||||||
GATGTCCGCTGCCATCAGCACCGGATAGTCAAACAGACCAGCGTTGATGTTCTCGGCATAACGCGCAGATTTATCTTTAAACTGCGTCATGCGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGCTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACGGTGATCGCGTGTTGGTCAACGATACAGTAAATGCAATGGTAGTCATCCTGCATGTTTACCCACTGACGCAGCGCACCCATGTAGTTACCAATGGTCAATTCACCTGAGGGCTGTGCGCCACTAAAAACGATGGGCTTAGTCATTTTTCGATTCC > NC_000913/3513231‑3513649 | gATGTCCGCTGCCATCAGCACCGGATAGTCAAACAGACCAGCGTTGATGTTCTCGGCATAACGCGCAGATTTATCTTTAAACTGCGTCATGCGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTTTGCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACaan < 1:92979/203‑2 (MQ=255) ccATCAGCACCGGATAGTCAAACAGACCAGCGTTGATGTTCTCGGCATAACGCGCAGATTTATCTTTAAACTGCGTCATGCGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTGCCGGCACGTGGGACTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGgcgc < 1:379308/251‑1 (MQ=255) gTCAAACAGACCAGCGTTGAGGTTCTCGGCATAACGCGCAGATTTATCTTTAAACTGCGTCATGCGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAg < 1:6804/192‑1 (MQ=255) cGTTGATGTTNTNGGCATAACGCGCAGATTTATCTTTAAACTGCGTCATGCGACTCAGTTCNCCGAAGTAGGNATANNAGTTNANTNCCCAGCCTAACTGTGCATGTTCCGGCACGNGGGACTGAACAAAAATGGTGTTTNNCTNNNGANNGATAc < 2:382972/156‑1 (MQ=255) cGTTGATGTTCTCGGCATAACGCGCAGATTTATCTTTAAACTGCGTCATGCGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGTTTTTCTCAGGATCGATAc > 1:382972/1‑156 (MQ=255) tATCTTTAAACTGCGTCATGCGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCTGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACGGTGATCGCGTGTTGGTCAACGATACAGTAAATGCAATGGTAGTCATCCTGCATGtt < 1:174992/250‑1 (MQ=255) tCATACGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTCCGGCACGTGGGACTGAAAAAAAATGGGGTTTTTCTCAGGCTCGATACCACAAGACAGATACAAGGCCAGCGTATCCAGCGTCGCTTTAc > 1:446116/1‑153 (MQ=255) ncGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCCGCCTAACTGTGCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACGGTGATCGCGTGTTGGTCAACGATCCAGTAAATGCAATGGTAGTCATCCTGCATGTTTACCCACTGACGCAGCGCAc > 1:91112/2‑251 (MQ=255) cGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGTNNTTCTCa > 2:28229/1‑96 (MQ=255) gCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTCCGGAACGTGGGACTGAACAAAAATGGTGTTTCTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGGATCCAGCGTCGATTTACGCAGCTTCCGTGCATCCTGGCGCACGGCGATCGCGTGTTGGTCAACGATACAGTAAATGCAATGGTAGTCATCCTGCATGTTTACCCACTGACGCAGCGCACCCATGTAGTTAc > 1:507669/1‑251 (MQ=255) cnGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACGGTGATCGCGTGTTGGTCAACGATACAGTAAATGCAATGGTAGTCATCCTGCATGTT‑ACCCACTGACGCAGCGCACCCATGTAGTTAcc > 1:395470/1‑250 (MQ=255) tataGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTTCGGCACGTGGGACTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAggn < 1:47217/103‑2 (MQ=255) gCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACgg > 1:21213/1‑124 (MQ=255) gACTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACGGTGATCGCGTGTTGGTCAACGATACAGTAAATGCAATGGTAGGCATCCTGCATGTTTACCCACTGACGCAGCGCACCCATGTAGTTACCAATGGTCAATTCACCTGAGGGCTGTgcg < 1:359000/222‑1 (MQ=255) aCTGAACAAAAATGGAGTTTTTCTCAGGATCGATACCACAAGCCAGATCCAAGGCCAGCGTATCCAGCGTCGATTTAc > 1:411821/1‑78 (MQ=255) cTGAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGc < 1:505524/79‑1 (MQ=255) gAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTaag > 1:195879/1‑74 (MQ=255) gAACAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACGGTGATCGCGTGTTGGTCAACGATACAGTAAATGCAATGGTAGTCATCCTGCATGTTTACCCACGGACGCAGCGCTCCCATGTAGTTACCAATGGTCAATTCACCTGAGGGCTGTGCGCCACTAAAAACGATGGGCTTAGTCATTTTTc < 1:460848/249‑1 (MQ=255) aCAAAAATGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACGGTGATCGCGTGTTGGTCAACGATACAGTAAATGCAATGGTAGTCATCCTGCATGTTTACCCACTGACGCAGCGCACCCATGTAGTTACCAATGGTCAATTCACCTGAGGGCTGTGCGCCACTAAAAACGATGGGCTTAGTCATTTTTCGAtt < 1:412969/251‑1 (MQ=255) aaaaaTGGTGTTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACGGTGATCGCGTGTTGGTCAACGATACAGTAAATGCAATGGTAGTCATCCTGCATGTTTACCCACTGACGCAGCGCACCCATGTAGTTACCAATGGTCAATTCACCTGAGGGCTGTGCGCCACTAAAAACGATGGGCTTAGTCATTTTTCGATTcc < 1:28229/251‑1 (MQ=255) | GATGTCCGCTGCCATCAGCACCGGATAGTCAAACAGACCAGCGTTGATGTTCTCGGCATAACGCGCAGATTTATCTTTAAACTGCGTCATGCGACTCAGTTCGCCGAAGTAGGTATAGCAGTTCAGTGCCCAGCCTAACTGTGCATGTTCCGGCACGTGGGACTGAACAAAAATGGTGCTTTTCTCAGGATCGATACCACAAGCCAGATACAAGGCCAGCGTATCCAGCGTCGCTTTACGCAGCTTCTGTGCATCCTGGCGCACGGTGATCGCGTGTTGGTCAACGATACAGTAAATGCAATGGTAGTCATCCTGCATGTTTACCCACTGACGCAGCGCACCCATGTAGTTACCAATGGTCAATTCACCTGAGGGCTGTGCGCCACTAAAAACGATGGGCTTAGTCATTTTTCGATTCC > NC_000913/3513231‑3513649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |