| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,246,535 | G→A | intergenic (+13/‑117) | exuT → / → exuR | hexuronate transporter/DNA‑binding transcriptional repressor ExuR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,246,535 | 0 | G | A | 100.0% | 53.8 / NA | 20 | intergenic (+13/‑117) | exuT/exuR | hexuronate transporter/DNA‑binding transcriptional repressor ExuR |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (11/9); total (11/9) | |||||||||||
GGTTTAACCGGGATGTCCGCATGGCTGGCAAGTACGCTGTTTGCGCTGGTTGTCGGTGCACTGGCTGACACCATCGGCTTCAGCCCGCTGTTCGCAGTTCTGGCAGTGTTCGACCTGTTAGGTGCGCTGGTTATCTGGACCGTGTTGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGA > NC_000913/3246313‑3246755 | ggTTTAACCGGGATGTCCGCATGGCTGGCAAGTACGCTGTTTGCGCTGGTTGTCGGTGCACTGGCTGACACCATCGGCTTCAGCCCGCTGTTCGCAGTTCTGGCAGTGTTCGACCTGTTAGGTGCGCTGGTTATCTGTACCGTGTTGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAATCACATATCGATCCCGCGCTGCAACATTATCGGTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCCTtct < 1:208841/251‑1 (MQ=255) ggTGCACTGGCTGACACCATCGGCTTCAGCCCGCTGTTCGCAGTTCTGGCAGTGTTCGACCTGTTAGGTGCGCTGGTTATCTGGACCGTGTTGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACCCATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTTTACTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTtca > 1:248123/1‑212 (MQ=255) ggCAGTGTTCGACCTGTTAGGTGCGCTGATTATCTGGACCGTGTTGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGAACCGCACCATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAgc > 1:418505/1‑142 (MQ=255) gACCTGTTAGGTGCGCTGGTTATCTGGACCGTGTTGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTagag > 1:410628/1‑170 (MQ=255) ccTGTTAGGTGCGCTGGTTATCTGGACCGTGTTGCAGAACCAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCATTCTCAGGCGGCTTTTTCATCACTGCGCGTAGAGCTAAACTCGc > 1:340918/1‑178 (MQ=255) gnNCCGTGTNNCAGAACAAACCGGCGATTGAGGTTGCGAAGGAAACACATAAAGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTTGAGTGTccc < 2:17347/99‑1 (MQ=255) gtTGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACAATAACGTTGCGTGGAAAGTGTAGGTTCCCTTCAAAGCCGCCTTCTCAGTCGGCTTTCGCATCACTGCGAGTAGAGCTCAACTCGCAAAAGTGGTATAACAAATATAGTCTTCCGTATCACGCCTGGAGCGCATATGTAAATCACTGAAc < 1:504769/212‑1 (MQ=255) tGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCCTGGAgc < 1:341275/190‑1 (MQ=255) gCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGATTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAgc < 1:195214/251‑1 (MQ=255) ggCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAATGTTTGGTGTAAATTTTAGATTCCCTTCAAAGACGCATTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGATAAACTCGCAAAAGTGGtata > 1:498048/1‑145 (MQ=255) gCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACGGCAACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCAGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGCGCTAAACTCGCAAAAGTGGTATAACAATTATAGTCTGCCGTATCATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAggg > 1:491621/1‑251 (MQ=255) gATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATGTTAGTTTCCCTTCAAAGCCGCCTTCTCATGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGGGTTATAACAAATATAGTCTGCCGGATCATGCCTGGAGCGCATATGGAATTCACTGTACCAc < 1:323317/197‑1 (MQ=255) gAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTTTAGTGTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACtn < 1:45763/107‑2 (MQ=255) ngcgcAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATcaaca > 1:148270/2‑204 (MQ=255) cgcAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCCGTCTCAg < 1:422261/82‑1 (MQ=255) gcAGGAAACACATAACGATACCGCACCGCAACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGAGGCTTTTtcatc > 1:429157/1‑95 (MQ=255) aaCACNTAACGNTNNCGCACCGCAACATTAACGTNTCGTGTAAATTTTAGNTTCCNTTCAANgcngn > 2:195306/1‑66 (MQ=255) aaCACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAATTGTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCTCAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCCTg < 1:195306/152‑1 (MQ=255) caTAACGATCCCGCACAGCAACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGCGGAGAGCTAAACTCGAAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCATGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAAct > 1:332103/1‑251 (MQ=255) ccgcaccgcaACATTAACGTTTCGTGTAAATTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGTTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGa > 1:116454/1‑250 (MQ=255) | GGTTTAACCGGGATGTCCGCATGGCTGGCAAGTACGCTGTTTGCGCTGGTTGTCGGTGCACTGGCTGACACCATCGGCTTCAGCCCGCTGTTCGCAGTTCTGGCAGTGTTCGACCTGTTAGGTGCGCTGGTTATCTGGACCGTGTTGCAGAACAAACCGGCGATTGAGGTGGCGCAGGAAACACATAACGATCCCGCACCGCAACATTAACGTTTCGTGTAAGTTTTAGTTTCCCTTCAAAGCCGCCTTCTCAGGCGGCTTTTTCATCACTGCGAGTAGAGCTAAACTCGCAAAAGTGGTATAACAAATATAGTCTGCCGTATCATGCCTGGAGCGCATATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGA > NC_000913/3246313‑3246755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |