Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,209,309 C→T A429V (GCG→GTG)  ttdT → L‑tartrate:succinate antiporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,209,3090CT100.0% 48.4 / NA 19A429V (GCG→GTG) ttdTL‑tartrate:succinate antiporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (8/11);  total (8/11)

ACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTAC  >  NC_000913/3209152‑3209533
                                                                                                                                                             |                                                                                                                                                                                                                                
aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGGGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTg                                                                                                                                     <  1:354622/251‑1 (MQ=255)
aCGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTGCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGGCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTg                                                                                                                                     <  1:460502/251‑1 (MQ=255)
               gCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCAAGGCGTATACCTCCGCTCTCGAACCGATGATGATTGCTGCTGCGCTGGAGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggg                                                                                                                            >  1:482010/1‑245 (MQ=255)
                                       cTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTgggggn                                                                                                                         <  1:121723/224‑2 (MQ=255)
                                         gcgcTTCTTGTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGc                                                                                            <  1:14080/251‑1 (MQ=255)
                                                     cGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCg                                                                                >  1:85251/1‑251 (MQ=255)
                                                                     tataCCTCCGCTCTCGCACCGATGATGATTGCGGCTTCGCGGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGTCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCt                                                                                                                                                                                                          <  1:462854/113‑1 (MQ=255)
                                                                       taCCTCCGCTCTCGCACCGATGATGATTTCTGCTGCGCTGGCGATGCCGGAAAGCCCGCTGCCGGGGTTCTGCCTTATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCAc                                                                                                                                                                                           <  1:246046/126‑1 (MQ=255)
                                                                         ccTCCGCTCTCGCACAGATGATGATTGCTGATGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCg                                                                                                                                                                                         >  1:424256/1‑126 (MQ=255)
                                                                                      nccGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTc                                                                                                                                                                                                                       >  1:311516/2‑83 (MQ=255)
                                                                                      aCCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTc                                                                                                                                                                                                                       <  2:311516/83‑1 (MQ=255)
                                                                                                   gctgctgcGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGTTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCTCAGTCCTATTTTCTTCGGCAGTTGTTATCTGCCAACGGCGGATTACGGGCGACTGGGGGCGATTTTTGGGCTTATATTCCTCTGATTGCTGTGGATGACCGGCTTACTTTGGATGCCCGTGGTGTTGCTTTAAGGGAGGACGGTGc                                   <  1:379517/250‑1 (MQ=255)
                                                                                                                cGATGCCGGAAATCCCGATGCCGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTCTGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTcc                    >  1:108199/1‑251 (MQ=255)
                                                                                                                           aTCCCGCTGCCGGTGTTCTGCCTGATGGTTTGTGTGGCCATTGGTCTGGGGAGCCTTCTTACACCATACGCCACCGGCCCCAGTCCGCTTTACTACGGCAGTGGTTATCTGCCAACGGCGGCTTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGGTTACTGTGGATGcc                                                                >  1:198813/1‑197 (MQ=255)
                                                                                                                                gCTGCCGGTGTTCTGCCGGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCAGGTGATTACCGGCTTACTGTGGAGGCCCGTGGTGTTGCTTTAAGTGATGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGttt     <  1:205488/251‑1 (MQ=255)
                                                                                                                                   nccGGTGTTCTGCCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGAGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGGGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTAc  >  1:131368/2‑251 (MQ=255)
                                                                                                                                         gtTCTGCCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAGcggcgg                                                                                                                                            <  1:112215/107‑1 (MQ=255)
                                                                                                                                         gtTCTGCCTGATGGTTGGTGTGGCAANTGGTCTNNGGNGCCTTCTTACACCATACGCNACNNNCNNNANTCCGANTTNNTACGGCAGTNGTTATCTGCCAAcggcgg                                                                                                                                            >  2:112215/1‑107 (MQ=255)
                                                                                                                                              gCCTGATGGTTGGTGTGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCGCCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGcn                                                                                                                                  <  1:99869/112‑2 (MQ=255)
                                                                                                                                                             |                                                                                                                                                                                                                                
ACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCGGAAATTGCTCTCCGGCACCCAATAGTTTTAC  >  NC_000913/3209152‑3209533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: