Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,101,599 C→T A9T (GCA→ACA)  yggN ← DUF2884 domain‑containing protein YggN

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,101,5990CT100.0% 50.7 / NA 20A9T (GCA→ACA) yggNDUF2884 domain‑containing protein YggN
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (7/13);  total (7/13)

CGCCTTCATCAATCCACGGCAGCGTGCTGCGTAGTTCAGCCTGATAATCCTTCGCCTGCTCGCGCTGGGCGGCATTCAGGGAATATTGCTTACCGTTATACATCACGTTGCCGTCTGGCGTGATCACCAGATTGCCGTTTTCGCCCTTCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTT  >  NC_000913/3101353‑3101786
                                                                                                                                                                                                                                                      |                                                                                                                                                                                           
cgcCTTCATCAATCCACGGCAGCGTGCTGCGTAGTTCAGCCTGATAATCCTTCGCCTGCTCGCGCTGGGCGGCATTCAGGGAATATTGCTTACCGTTATACAACACGTTGCCGTCTGGCGTGATCACCAGATTGCCGTTGTCGCCCTTCACCTTCACTGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTTACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTgtcgcc                                                                                                                                                                                         <  1:503992/251‑1 (MQ=255)
             ccACGGCAGCGTGCTGCGTAGTTCAGCCTGATAATCCTTCGCCTGCTCGCGCTGGGCGGCATTCAGGGAATATTGCTTACCGTTATACATCACGTTGCCGTCTGGCGTGATCACCAGATTGCCGTTTTCGCCCTTCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTgn                                                                                                                                                                            <  1:96662/251‑2 (MQ=255)
                                   tCAGCCTGATAATCCTTCGCCTGCTCGCGCTGGGCGGCATTCAGGGAATATTGCTTACCGTTATACATCACGTTTCCGGCTGGCGTGATCACCAGATTGCCGTTTTCGCCCTTCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACCGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCaan                                                                                                                                                       <  1:63874/250‑2 (MQ=255)
                                   tCAGCCTGATAATCCTTCGCCTGCTCGCGCTGGGCGGCATTCAGGGAATATTGCTTACCGTTATACATCACGTTGCCGTCTGGCGTGATCACCAGATTGCCGTTTTCGCCCTTCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAg                                                                                                                                                       <  1:440489/250‑1 (MQ=255)
                                                                         aTTCAGGGAATATTGCTTACCGTTATACATCACGTTGCCGTCTGGCGTGATCACCAGATTGCCGTTTTCGCCCTTCACCTGCGCGGTTTGCGGGCGGACAATCACATCGTCACTCTGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTTCCGTCACTGAAAGTGCTGTCGCcagc                                                                                                                                                                                      <  1:208129/181‑1 (MQ=255)
                                                                              gggAATATTGCTTACCGTTATACATCACGTTGCCGTCTGGCGTGATCACCAGATTGCCGTTTTCGACCTTCACATGCACGGTTTGCGGGCTGACAATAACATCAACACGCGGCGTGACGGTGCACTGGTAGACGGCGTGAGCGGTCATTGCCGTCACTGCAAGTGCTGTCGCCAGACGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAg                                                                                                                                        >  1:166799/1‑222 (MQ=255)
                                                                                                       cACGTTGCCGTCTGGCGTGATCACCAGATTGCCGTTTTCGCCCTTCACCTGCATGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcgg                                                                                  <  1:3236/251‑1 (MQ=255)
                                                                                                                    ggCGTGATCACCAGATTGCCGTTTTCGCCCTTCACCGGCACGGTGTGCGGGCTGACAATCACAGCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTTAGCGGTCATTGCCGTCACGGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAg                                                                                                                                                       <  1:462675/169‑1 (MQ=255)
                                                                                                                         gATCACCAGATTGCCGTTTTCGCCCTTCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCg                                                                                         <  1:352271/226‑1 (MQ=255)
                                                                                                                                       cGTTTNNGCNNNTCNNCTGCACGGTTTGCGGGCTGACAANCACATCGTCACGCGGCGTGACGCTGCACTNGNANTCGGNNTGANCGGTCATTGCNGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGcatca                                                                                                                                                                      >  2:365021/1‑135 (MQ=255)
                                                                                                                                       cGTTTCCGCCCTTCACCTGCACGGTTTGCGGTCTGACAATCTCATCGTCACGCTGCTTGCCTCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTTCTGTCTCCAGCATCATTTTGCGcatca                                                                                                                                                                      <  1:365021/135‑1 (MQ=255)
                                                                                                                                              gCCCTTCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCttt                                           >  1:382799/1‑251 (MQ=255)
                                                                                                                                               cccTTCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCACGAAAAAATCAGGCCAGCATTTGCTGGcc                                                                                                                            >  1:66930/1‑169 (MQ=255)
                                                                                                                                                      ccTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGTGTGAGCGGTCAATGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATGTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc                                                                                               <  1:400622/191‑1 (MQ=255)
                                                                                                                                                       cTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc                                                                                               >  1:10630/1‑190 (MQ=255)
                                                                                                                                                                                tccgatccACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGtt          <  1:173455/243‑1 (MQ=255)
                                                                                                                                                                                       cACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCAttt  <  1:28342/251‑1 (MQ=255)
                                                                                                                                                                                                                          gCGGTCATTGCCTTCACTGAAATTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTNGCCNCAGANTGNTAACAAAGTACGCGTNTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGANNGNNNANCTTTCCAg                                       <  2:349749/179‑1 (MQ=255)
                                                                                                                                                                                                                          gCGGTCATTGCCGTCACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATAATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGCTTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAg                                       >  1:349749/1‑179 (MQ=255)
                                                                                                                                                                                                                             nacATTGCCGACACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCACGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCAATGCCGGAt                                                                                      >  1:128552/3‑129 (MQ=255)
                                                                                                                                                                                                                                        cACTGAAAGTGCTGTCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCTTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAg                                       <  1:428163/165‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                           
CGCCTTCATCAATCCACGGCAGCGTGCTGCGTAGTTCAGCCTGATAATCCTTCGCCTGCTCGCGCTGGGCGGCATTCAGGGAATATTGCTTACCGTTATACATCACGTTGCCGTCTGGCGTGATCACCAGATTGCCGTTTTCGCCCTTCACCTGCACGGTTTGCGGGCTGACAATCACATCGTCACGCGGCGTGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCATTT  >  NC_000913/3101353‑3101786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑