| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 368,583 | C→T | intergenic (‑163/‑28) | mhpR ← / → mhpA | DNA‑binding transcriptional activator MhpR/3‑(3‑hydroxyphenyl)propanoate hydroxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 368,583 | 0 | C | T | 100.0% | 44.7 / NA | 17 | intergenic (‑163/‑28) | mhpR/mhpA | DNA‑binding transcriptional activator MhpR/3‑(3‑hydroxyphenyl)propanoate hydroxylase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (8/9); total (8/9) | |||||||||||
GGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGACATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGCCCGGTTGGGCTGATGATGGCGAACTATCTCGGCCAGATGGGCATTGACGTGCTGGTGGTGGAGAAACTCGATAAGTTGATCGACTACCCGCGTGCGATTGGTATTGATG > NC_000913/368373‑368791 | ggTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACATACGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATacaac > 1:440699/1‑251 (MQ=255) aaGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGTACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACAcc < 1:380252/250‑1 (MQ=255) gCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACACCCTg > 1:210217/1‑251 (MQ=255) cATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATTTTTTTAACAAAATAAGTGGCGCTGTACTGTGCGCGCAACGATATTGGGTCCTATTCGTGAGGTACCGAAATGGCAATACAACACCCTGACATCCAGCCTGCGGTTAACCATAGCg < 1:341687/249‑1 (MQ=255) gACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACATTCGGGCATGATTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACACTAAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGc > 1:272366/1‑251 (MQ=255) cATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACATTCGGGCATGTTTTGATTGTAGCAGAACACACCCTTCCTATACTGAGCGCACAATCAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCg > 1:363068/1‑251 (MQ=255) taGTTAAAACAACGTGGTGCACCTGGTGCACATTCGGGCATGTTTTGATTGTAGTCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCGGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAGCACCGTGACATCGAGCCTGCTGTTAGCCATAGCGTTCAGGTGGCTTTCGTTGGTGCCGGCCCgg < 1:426937/249‑1 (MQ=255) aCCTGGTGCACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTGACATGTTTTTAACAAAATAAGTTGCGCTTTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAgg < 1:80539/146‑1 (MQ=255) cATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGAGCACAATAAAAAATCATCTACATGTTTTTAACAAAATCAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACCACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGCCCGGTTGGGCTGATGATGGCGAACTATCTCGGCCAGATGGGCAt > 1:294551/1‑251 (MQ=255) gCCGAAAACACCCTTCCTATACTGAGCGCACCATAAAAAATCATTTACATGTTGTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGc < 1:333814/125‑1 (MQ=255) cacCCTGCCTATACTGAGCGCACAATAAAAAATCATGTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAgg < 1:457888/105‑1 (MQ=255) cccTTCCTATACTGAGCGCACAATAAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGCCGGGTTGGGCTGATGATGGCGAACTATCTCGGCCAGATGGGCATTGACGTGCTGGTGGTGGAGAAACTc < 1:331467/251‑1 (MQ=255) gAGCGCACAATAAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGGCCGGTTGTGCTGATGATGGCGAACTATCTCGGCCAGATGGGCATTGACGTGCTGGTGGTGGAGAAACTCGATAAGTTGATCg < 1:247594/251‑1 (MQ=255) ggttttAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGCCCGGTTGGGCTGATGATGGCGAACTATCTCGGCCAGATGGGCATTGACGTGCTGGTGGTGGAGAAACTCGATAAGTTGATCGACTACCCGCGTGCGATTGGTATtgatn < 1:150259/249‑2 (MQ=255) gTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGCCCGGTTgg > 1:24604/1‑126 (MQ=255) gTACTGTGCGCGCAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAAAACCCTGACATCCa > 1:228951/1‑72 (MQ=255) ngcgcAACGATATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAGCACCCTGACATCCAGCCTGCTGTTACCCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGCCCGGTTGGGCTGATGATGGCGaa > 1:64025/2‑133 (MQ=255) | GGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACATTCGGGCATGTTTTGATTGTAGCCGAAAACACCCTTCCTATACTGAGCGCACAATAAAAAATCATTTACATGTTTTTAACAAAATAAGTTGCGCTGTACTGTGCGCGCAACGACATTTTGTCCGAGTCGTGAGGTACTGAAATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGCCCGGTTGGGCTGATGATGGCGAACTATCTCGGCCAGATGGGCATTGACGTGCTGGTGGTGGAGAAACTCGATAAGTTGATCGACTACCCGCGTGCGATTGGTATTGATG > NC_000913/368373‑368791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |