| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,085,118 | C→T | S265N (AGC→AAC) | speA ← | biosynthetic arginine decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,085,118 | 0 | C | T | 100.0% | 41.1 / NA | 16 | S265N (AGC→AAC) | speA | biosynthetic arginine decarboxylase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (11/5); total (11/5) | |||||||||||
GAACAGTCGGACTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATAGAAACGCGCGGATTCACGAACGCCTGTCGCGATATCGCGAATATTCGCCATCTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGCTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGCCGAACTTCGATTTTTCCCCGCCGGAGGACTGCCATTTACCCGAACCCTGCGAAGCCAGACGTGCACGCACGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGCCCCATCTTCTCGCCAAT > NC_000913/3084932‑3085359 | gAACAGTCGGACTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATAGAAACGCGCGGATTCACGAACGCCTGTCGCGATATCGCGAATATTCGCCATCTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGcc < 1:397258/251‑1 (MQ=255) ccgccgccgACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATAGAAACGCGCGGATTCACGAACGCCTGTCGCGATATCGCGACTATTCGCCATCTGCGAACCGAGGAGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGCCGAACTTCGATTTTTCCCCGCCGGAGGAc > 1:498686/1‑234 (MQ=255) cccAGCTTGTGCAGTTCCACATAGAAACGCGCGGATTCAAGAACGCCTGTCGTGATATCGCGAATATTCGCCATCTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGAAGCCCGGc > 1:272106/1‑125 (MQ=255) ncgcgGATTCACGAACGCCTGTCGCGATATCGCGAATATTCGCCATCTGCGAACCGAGGAGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGCCGAACTTCGATTTTTCCCCGCCGGAGGACTGCCATTTACCCGAACCCTGCGAAGCCAGACGTGCACGCACGccc > 1:97814/2‑218 (MQ=255) gcgcgGATTCACGAACGCCTGTCGCGATATCGCGAATATTCGCCATCTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGAc > 1:228707/1‑90 (MQ=255) cACGAACGCCTGTCGCTATATCGAGAATATTCGCCATCTGCGAACCGAGGTGGAAGTGCAGTNGGGNCAGGNTGNCGACACGGCCGGCGANACGCAGGGTTTCAACCAGTTGCAGTCCCTGAGTCGCAGCCAGGCNNANNNTNTATTTTTc < 2:356201/151‑1 (MQ=255) cACGAACGCCTGTCGCGATATCGCGAATATTCGCCATCTGCGAACCGAGGTGGAAGTGCAGTNGTTNCAGGNTGNCGAGACGCCCGGCTTNACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGCNNANNNTNGATTTTTc < 2:356192/151‑1 (MQ=255) cACGAACGCCTGTCGCGATATCGCGAATATTCGCCATCTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGGCGCACGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGTCGCCAGGCCGAACTTTGATTTTTc > 1:356201/1‑151 (MQ=255) cACGAACGCATGTCGCGATATCGCGAATATTCGCCATCTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCAGGGATTAACGCAGGGGTTCACACAGTTGCAGTACCGGAGTCGAAGCCAGGAAGAACTTCGATTTTTc > 1:356192/1‑151 (MQ=255) gTCGCGATACCGCGAATATTCGCCGTCTGCGAACCGGGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCCCAGCTTCACGCAGGGTTTCAACCAGTTGCAGTGCCTGAGTCGCACCCAGGCCGAACTTCTGTTGGCCCCCGCCGGAGGACTGCCATTTTCCCGAACCCTGCGAACCCAGACGTACACGCACGCCCAGGCGAGGAACGACATTCAGACGTCCTGCTTCATCCAGCACAATGGCGATTTc < 1:461504/251‑1 (MQ=255) cATCTGCGAACCGAGGTGGAAGTTCAGTAGTGGCAGGTTGGCGAGACGCCCGGc < 1:106995/54‑1 (MQ=255) cATCTGCGAACCGAGGTGGAAGTGCANTAGTTGNNGGNTGTCGAGACGCCCGGc > 2:106995/1‑54 (MQ=255) cTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCNNAGcc > 2:18034/1‑94 (MQ=255) cTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGCCGAACTTCGATTTTTCCCCGCCGGAGGACTGCCATTTACCCGAACCCTGCGAAGcc < 1:18034/154‑1 (MQ=255) cTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGCCGAACTTCGATTTTTCCCCGCCGGAGGACTGCCATTTACCCGAACCCTGCGAAGCCAGACGTGCACGCACGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGAt > 1:224640/1‑248 (MQ=255) cGAACCGAGGTGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGCCGAACTTCGATTTTTCCCCGCCGGAGGACTGCCATTTACCCGAACCCTGCGAAGCCAGACGTGCACGCACGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCa > 1:373716/1‑202 (MQ=255) ggTGGAAGTGCAGTAGTTGCAGGTTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGCCGAACTTCGATTTTTCCCCGCCGGAGGACTGCCATTTACCCGAACCCTGCGAAGCCAGACGTGCACGCACGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGcccc < 1:115282/251‑1 (MQ=255) gCAGTAGTTGCAGGTTGTCGAGACGCCCGGCTTCACGCCGGGTTTCAACAAGTTGCCGTACCTGAGTCGCAGCCAGGCCGAACTTCGATTTTTCACCGCCggag > 1:227628/1‑104 (MQ=255) ngtTGCAGGTTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGACGCAGCCAGGCCGAACTTCGATTTTTCCCCGCCGGAGGACTGCCATTTACCCGAACCCTGCGAAGCCAGACGTGCACGCACGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGCTTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGCCCCATCTTCTCGCCAAt > 1:300437/2‑251 (MQ=255) | GAACAGTCGGACTGCGAACGAGTACCTTCATAATCCACGCCCAGACCGCCGCCGACGTCGAAGCACTGAATATTGACGCCCAGCTTGTGCAGTTCCACATAGAAACGCGCGGATTCACGAACGCCTGTCGCGATATCGCGAATATTCGCCATCTGCGAACCGAGGTGGAAGTGCAGTAGTTGCAGGCTGTCGAGACGCCCGGCTTCACGCAGGGTTTCAACCAGTTGCAGTACCTGAGTCGCAGCCAGGCCGAACTTCGATTTTTCCCCGCCGGAGGACTGCCATTTACCCGAACCCTGCGAAGCCAGACGTGCACGCACGCCCAGACGAGGAACGACATTCAGACGTTCTGCTTCATCCAGCACAATGGCGATTTCTGACATCTTCTCAATGACCAGATAGACCTTGTGCCCCATCTTCTCGCCAAT > NC_000913/3084932‑3085359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |