| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,736,417 | C→T | A91V (GCC→GTC) | bamD → | outer membrane protein assembly factor BamD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,736,417 | 0 | C | T | 100.0% | 49.9 / NA | 19 | A91V (GCC→GTC) | bamD | outer membrane protein assembly factor BamD |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (10/9); total (10/9) | |||||||||||
GCCGCCACACTAAGCCTGTTTTTGGCGGGTTGCTCGGGGTCAAAGGAAGAAGTACCTGATAATCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGCAGGACGGTAACTGGAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGCCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTACATGCGTGGCCTGACCAATATGGCGCTGGATGACAGTGCGCTGCAAGGGTTCTTTGGCGTCGATCGTAGCGATCGCGATCCTCAACATGCACGAGCTGCGTTTAGTGACTTTTCCAAACTGGTGCGCGGCTATCCGAACAGTCAGTACACCACCGATGCCACCAAACGTCTGGTAT > NC_000913/2736173‑2736650 | gccgccACACTAAGCCTGTTTTTGGCGGGTTGCTCGGGGTCAAAGGAAGAAGTACCTGATAATCCGCCAAATGACATTTACGCGACTGCAGAACAAAAGCTGCAGGCCGGTAACTGGAGACAGGCAATAACGCAACTGGAAGAGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCatcg > 1:348984/1‑250 (MQ=255) gTTGCTCGGGGTCAAAGGAAGAAGTACCTGATAAGCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGCAGGACGGTAACTGGAGACAGGCAAGAACGCAACTGGAAGCGTGATATAATCGCTATCCGGCTGGACCGTATGCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGGTATCACATGCTCTCATCTATCGTGTTAGTCGGCTTAAcc < 1:166680/243‑1 (MQ=255) gCTCGGGGTCAAAGGACGAAGTACCTGATAATCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGAAGGACGGTAACTGGAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCg > 1:410752/1‑251 (MQ=255) gTACCTGCTAATCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGCAGGACGGTAACTGGAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCg > 1:157036/1‑212 (MQ=255) gTACCTGATAATCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGCAGGACAGTAACTTGAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCGCCGTAACCCGACCCATCCGAATATCGATTATGTCATGTa < 1:111104/251‑1 (MQ=255) aacaaAAGCTGCAGGACGGTAACTGGAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTACATGCGTGGCCTGACCAATATGGCGCTGGATGACAGTgcg > 1:6629/1‑251 (MQ=255) naGGACGGTAACTGGAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTACATGCGTGGCCTGACCAATATGGCGCTGGATGACAGTGCGCTGCAAGGGtt > 1:126948/2‑251 (MQ=255) ggAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCGCCTTAATCCGACCCATCCGAATATCGATTATGTCATGTACATg < 1:428947/191‑1 (MQ=255) gagaCAGGCAATAACGCAACTTGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGTATCTCATCTACGCCTACTATAAAAACTCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTAGTCGCCTGAGCTCGACCCATCCGAATATCGATTATGTCATGTACAGTCGTGGGCTGACCAATATGGCGCTGGATGACAGTGCGCTGCAAGGGTTCTTTTGCGTCGATc < 1:358174/251‑1 (MQ=255) cAGGCAATAACGCAACTGGAAGCTTTATATAAGCGCTATTCGTATGGTCCGTATTCGCAGCAGATTCAGCTTGATCTCACCGACGCCTACTATAAAAACGCCGATTTGCCGGTAGCACAGGCTGTCatcgatc < 1:496793/133‑1 (MQ=255) tttGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTACATGCGTGGCCTGAcc < 1:30945/156‑1 (MQ=255) gTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACCCCTACTATAAAAAAGCAGATCTGAGGTTAGCAAAGGATGTCTTAGATCGTTATCTTCGCCTTAACCCGACCACTCCGACTCTCCATTCTGTCATGTACATGCGTGACCTGACCAATATGGCGCTGGATGACAGTGCGCTGCAAGGGTTATTTGGCGTCGATCGTAGCGATCGCGATCCTCAACATGCACGAGCTGCGTTTAGTGACTTTTcc > 1:345639/1‑251 (MQ=255) gCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGACTGTCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTCCAtn < 1:62621/102‑2 (MQ=255) nctactaTAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCCCATATCGATTCTGTAATGTACATCCGTGGCCTGACCAATATGgcg > 1:54870/2‑122 (MQ=255) tactaTAAAAACGCCGATTTTTCTTTAGCACAGGCTTTCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGt < 1:328318/89‑1 (MQ=255) ctaTAAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGCTCGTTTTATTCGCCTTAAccc > 1:435299/1‑63 (MQ=255) ataAAAACGCCGATTTGCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTACATGCGTGGCCTGACCAATATGGCGCTGGATGACAGTgcg < 1:202677/131‑1 (MQ=255) gCCGTTAGCACAGGCTGTCATCGATCGTTTTATTCGCCTTAACCCGACCCATACGACTATCGCTTATGTCATGTACATGCGTGGCCTGACCAATATGACGCTGGATGACAGTGCGCTGCAAGGGTTCTTTGGCGTCGCTCGTAGCGATCGCGATCCTCAACATGCACGAGCTGCGTTTAGTGACTTTTCCAAACTGGGGCGCGGCTATCCGAACAGTCAGTACACCACCGATCCCCCCAAACGTCTGGTAt > 1:258545/1‑251 (MQ=255) ggCTGTCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTACATGCGTAGCCTGAc > 1:260607/1‑78 (MQ=255) | GCCGCCACACTAAGCCTGTTTTTGGCGGGTTGCTCGGGGTCAAAGGAAGAAGTACCTGATAATCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGCAGGACGGTAACTGGAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGCCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTACATGCGTGGCCTGACCAATATGGCGCTGGATGACAGTGCGCTGCAAGGGTTCTTTGGCGTCGATCGTAGCGATCGCGATCCTCAACATGCACGAGCTGCGTTTAGTGACTTTTCCAAACTGGTGCGCGGCTATCCGAACAGTCAGTACACCACCGATGCCACCAAACGTCTGGTAT > NC_000913/2736173‑2736650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |