| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,341,035 | G→A | A160T (GCA→ACA) | lapB → | lipopolysaccharide assembly protein B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,341,035 | 0 | G | A | 100.0% | 51.0 / NA | 19 | A160T (GCA→ACA) | lapB | lipopolysaccharide assembly protein B |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (11/8); total (11/8) | |||||||||||
CGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAGCGCCCGCGTATCCATAATGATGGGACGCGTGTTTATGGCG > NC_000913/1340799‑1341235 | cgcgTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGGTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGcc > 1:257875/1‑251 (MQ=255) aGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTgg < 1:442993/251‑1 (MQ=255) ggCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATgg < 1:355115/251‑1 (MQ=255) ccgccgGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCCTTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGCAAACAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGCCATGACCTTg > 1:365886/1‑251 (MQ=255) tttATATGACCGCGCGGAAGACATGTTCAATCAGCTTACCGATGAAACTGACGTCCGCAGTGCCGCGCTGCCACAGTTGCGAAAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTg < 1:453103/121‑1 (MQ=255) cTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAAt > 1:10547/1‑73 (MQ=255) cTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAAt < 2:10547/73‑1 (MQ=255) gNNTNNCGCNTTGGCGCGCTGCAACAGTTGCNNCAAATCTACNAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTGGTGAAGNTGGGTAAAGNNAANCAGCGNGNNNANNNTGNCCATTTCTACTGTGAGTTANCCNNGCAGCANATGGCCAGCGACGATCTCGATCGTGc < 2:108479/185‑1 (MQ=255) gACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGc > 1:108479/1‑185 (MQ=255) cTTCCNNATNNNCGNNCGGCAACAGTTGCTACAAATCTANCAGGCTACCAGTGCGTGGCAGACAAAAATNGNTNTTGCNNAACNCATGGTGAAGNTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTCCTGTGAGTNANCCCTGCAGCATATGGCCAGc > 2:374236/1‑166 (MQ=255) cTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAGCGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTGGAAATTGCCCAGGTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGCCATGACCTTg < 1:357162/193‑1 (MQ=255) cTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGc < 1:374236/166‑1 (MQ=255) cTTCCGCANTNNNGNNCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCANAAAACACTTGATGTTNCCNAACCNCCGNTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGCCGATCTCGATCGTGCCATGACCTTg > 2:357162/1‑193 (MQ=255) gcgcgcTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGAt > 1:267082/1‑206 (MQ=255) ncgcTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAGCGCCCGCGTATCCATAATGATGGGACGCGTGTTTATGGc > 1:146539/2‑251 (MQ=255) cgcTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACACTTGATGTTGACGAACGCCTGGTGAAGCTGGGTAAAGATACACAGCGCGTCGAACTTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCTAGCGACGATCTCGATCGTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAGCGCCCGAGTATCCATAATGATGGGACGCGTGTTTATGGCg > 1:502862/1‑251 (MQ=255) tGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGcn < 1:301485/101‑2 (MQ=255) tGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGcc > 2:301485/1‑101 (MQ=255) tACCAGTGAGTGGCAGAAAACAATTGATGTTGCCGAACGCCTGGGGAAGCTGGGTAACGATAAACAGAGAGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGCCATGACCTTGc > 1:449995/1‑149 (MQ=255) | CGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAGCGCCCGCGTATCCATAATGATGGGACGCGTGTTTATGGCG > NC_000913/1340799‑1341235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |