| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,310,770 | A→G | H32H (CAT→CAC) | yciI ← | protein YciI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,310,770 | 0 | A | G | 100.0% | 63.7 / NA | 23 | H32H (CAT→CAC) | yciI | protein YciI |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/14); total (9/14) | |||||||||||
GCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGTTTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCATGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTGTAAAGTACGTTATTTGAAAGGGCGAAGATCTGCAACGGAAAGATGATGTCTTTGTTAAGGCCATGCATAAAGTAAGGGTAATTACGCCAAAAATG > NC_000913/1310535‑1310988 | gCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTACATGGTTTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCAAGGCCTGAGCTGCTTCCAGCGATTCAATTTCAGCAATAAAGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTaa > 1:200478/1‑250 (MQ=255) cGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGTTTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTa > 1:178767/1‑250 (MQ=255) aaaTATTGAATCTCTATTCAGAACACTTTCTTAAATGGTTTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGccn < 1:95182/250‑2 (MQ=255) aCTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTg < 1:23758/246‑1 (MQ=255) gtTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAgg < 1:19422/212‑1 (MQ=255) tagccTCCGGCCTCTACGTACGGGTCATCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCAGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCATCATCGTGCAGTAACTGTacac < 1:107279/174‑4 (MQ=255) tAGACTACGGCCGCGACGTACGGGTANGCGTCGNNCCNGGCCGGAGCTGCTTCCAGCNAGNNNANNNCNGCAATNACNNTTGAGCCAGNAGATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGNCAACAAACGNNCTTCATCGTGCAGTAACTGTANAc > 2:107279/1‑178 (MQ=255) gtacgGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCACCAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGtttt > 1:231625/1‑196 (MQ=255) cAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTACGTCCCGCAGCCCCTGGCTCGTTACAGTCTACCGCTAGCATAGGACCAGCTGTAAACAAACGACATTCATCGTGCAGTAACTGTAAACGTGCTAACTGTGCCGGACGAACGGAAAGGCGCTTTTCGAGACTATCAGCTTTGTCTTGAGCGTAAATAACATCCAACACGGGCACAACTCCTTGTTCGGGCAAGTTGTAAAGAACGTTATTTGaa > 1:482963/1‑250 (MQ=255) cAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTGTAAAGTACGTTATTTGAAAGGGCGAAGATCTg < 1:2923/250‑1 (MQ=255) aCGGTTGAGCCAGTAAATCACGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAACGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTGTAAAGTACGTTATTTGAAAGGGCGAAGATCTGCAACGGaa > 1:417604/1‑250 (MQ=255) gTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCCTTGGACAAGCTGTCAACAAACGACCATCATCGTCCAGAAACTGTAAACGTGCTAAATGTGCCCGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTGTAAAGTACGTTATTTGAAAGGGCGAAGATCTGCAACGGaa > 1:379070/1‑247 (MQ=255) aaaTCCCGCAGCCCCTGGAGCGTTACTGTTTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGGAACTTTAAACGTGCTAAATGTGTCGGACGAACGGAAAGGCGTTGTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACCCGGGCACAACTCCTTGGTCGTGAAAGTTGTAAAGTACGTTATTTGAAAGGGCGAAGATCTGCAACGGAAAGATGATGTCTTTg < 1:88138/250‑1 (MQ=255) ccccTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGTACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATac < 1:447002/152‑1 (MQ=255) ngTTACTGTCTACCGCTGGCATTGGACAAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTGTAAAGTACGTTATTTGAAAGGGCGAAGATCTGCAACGGAAAGATGATGTCTTTGTTAAGGCCATGCATAAAGTa > 1:44816/2‑250 (MQ=255) ctgtcgtccGCTGGCATTGTGCCAGCTGTCAACAAGCGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAAt < 1:243984/66‑1 (MQ=255) cATTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTGTAAAGTACGTTATTTGAAAGGGCGAAGATCTGCAACGGAAAGATGATGTc < 1:141327/207‑1 (MQ=255) aTTGGACCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTGTAAAGTACGTTATTTGAAAGGGCGAAGATCTGCAACGGAAAGATGATGTCTTTGTTAATGCCATGCATAAAGTAAGGGGAATTACGCCAAAAAtn < 1:126888/251‑2 (MQ=255) aCCAGCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTg < 1:508503/151‑1 (MQ=255) gCTGTCAACAAACGACCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTGTAAAGTACGTTATTTGaaa > 1:286747/1‑166 (MQ=255) nnnnnnnncNACNNTCATNGTGCAGTAACTGTAAACGTGCTAANTGTGCCGGACGAACGGAAAGGCGTTTGTCGANGNTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCNTTGTTCGGGANAGTNNTAAANTNCNTTATTTGAAAGGGCGAAGATCTGCAACGGNAAGATGATGTCTTTGTTAAGGCCNNGCNNNAANNAAggg < 2:379070/213‑1 (MQ=255) acaaACGGCCTTCATCGTGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGTTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCggg < 1:442989/133‑1 (MQ=255) cTTCATCGTGCATTAACTGTAAACGTGCTAAATGTGCCGGACGAACTGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTTAGCGTAAATAACATACAACACGTGCACAACGCCTTGTTCGGGAAAGTGCTAAAGTACGTTTTTTGAAAGGGCGAAGATCTGCGACGGAAAGATGATGTCTTTGTTAAgg < 1:477910/191‑1 (MQ=255) | GCAAAAACCGTGCCCTTAAATATTGAATCTCTATTCAGAACACTTTCTTAAATGGTTTCACTGAAACGTGTTCATAGACTCCTGCCGCTACGTACGGGTCAGCATCGGCCCAGGCCTGAGCTGCTTCCAGCGATTCAAATTCAGCAATAACGGTTGAGCCAGTAAATCCCGCAGCCCCTGGATCGTTACTGTCTACCGCTGGCATTGGACCAGCTGTCAACAAACGACCTTCATCATGCAGTAACTGTAAACGTGCTAAATGTGCCGGACGAACGGAAAGGCGTTTTTCGAGGCTATCAGCTTTGTCTTGAGCGTAAATAACATACAACACGGGCACAACTCCTTGTTCGGGAAAGTTGTAAAGTACGTTATTTGAAAGGGCGAAGATCTGCAACGGAAAGATGATGTCTTTGTTAAGGCCATGCATAAAGTAAGGGTAATTACGCCAAAAATG > NC_000913/1310535‑1310988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |