| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,135,235 | G→A | Q169Q (CAG→CAA) | flgG → | flagellar basal‑body rod protein FlgG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,135,235 | 0 | G | A | 100.0% | 30.8 / NA | 12 | Q169Q (CAG→CAA) | flgG | flagellar basal‑body rod protein FlgG |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (7/5); total (7/5) | |||||||||||
AAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTACGAAATCA > NC_000913/1135005‑1135455 | aaaGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAAGTTGGGCAGCTCAATCTcac < 1:198625/251‑1 (MQ=255) cccGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAAGTTGGGCAGCTCAAtc > 1:10932/1‑180 (MQ=255) cGTGACGGCTCTTTCCAGGTGGCTCAGAACGGGCAGCTGGCGACGGCTGGTGGTTTTCAGGCGCAGCCCGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCCTGGTCCGCGTACCTCAACAAGGCCTGGCAGCTCCGGTTCAAGtt > 1:466199/1‑165 (MQ=255) tGCAGCCAGCGATCACCAGTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGAGGGCGTGGTCAGCGTATCCCAGCAAGGTCAGGCAGCTCCGGTTCAAGTTGGGCAGCTCAATCTCACCACCTTTatgaatg < 1:81965/135‑1 (MQ=255) nccagcGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAAGTTgg > 1:301970/2‑102 (MQ=255) gccagcGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAAGTTgg < 2:301970/102‑1 (MQ=255) cGGCGANNGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAAGTTGGGCAGCTCAAtc < 2:10932/96‑1 (MQ=255) cGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAAGTTGGGCAGCTCAATCTCACCTCCTTGATTAATGACATCGGGCTGGAGAGCATTGGCg < 1:424159/101‑1 (MQ=255) ncGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAAGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTac > 1:127639/2‑104 (MQ=255) aCCCAACAAGGCCAGGCAGCTCCGGTTCAAGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACAACGGGATGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTCTCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTACGAAATCa > 1:276616/1‑250 (MQ=255) cccAACAAGGCCAGGCAGCTCCGGTTCAAGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGt > 1:254068/1‑214 (MQ=255) ggCAGCTCCGGTTCAAGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGCGGGCATTGGCGgaaa > 1:70167/1‑78 (MQ=255) | AAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTACGAAATCA > NC_000913/1135005‑1135455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |