| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 307,380 | C→T | W651* (TGG→TGA) | ecpC ← | putative fimbrial usher protein EcpC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 307,380 | 0 | C | T | 100.0% | 18.3 / NA | 9 | W651* (TGG→TGA) | ecpC | putative fimbrial usher protein EcpC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (2/7); total (2/7) | |||||||||||
GTAACTGTCGAGTGAGTTTTTGCTGTTCTGTAACTCCACCTCATATCTTCCATAGGGAGAGAGCGGGAGATAGTTACGCTTGCCGTTAAGCGGGAAAATCCGCCCGTTGATTTTGGCGCTGATCTGACCGTCGTCCTCCAGCCCGGTGTTGAATATCACCCCAGCGTTGCCATCAGTCCGCCCGCTGGCAGCAATGTTTTTACCCTGCCAGCCGACGCTGCCATTGGCGGTCAAGTTGGTATTGACGTAGCCGTCCGCCGCGCTATTGACGTTCAGCGTTCCGCTGGCGTAACGAGCGTCGAATTGTGCATACGCCCCGCCGCTGAGGGTTTTGTCATCACCGGTATCGCCGGAGATGGCACGTGACAGATTGGCACCAACAGTGCGAATGGTTCCTTCATCA > NC_000913/307173‑307575 | gTAACTGTCGAGTGAGTTTTTGCTGTTCTGTAACTCCACCTCATATCTTCCATAGGGAGAGAGCGGGAGATAGTTACGCTTGCCGTTAAGCGGGAAAATCCGCCCGTTGATTTTGGCGCTGATCTGACCGTCGTCCTCCAGCCCGGTGTTGAATATCACCCCAGCGTTGCCATCAGTCCGCCCGCTGGCAGCAATGTTTTTACCCTGTCAGCCGACGCTGCCATTGGCGGTCAAGTTGGTATTGACGTAGc < 1:138534/251‑1 (MQ=255) gTTCTGTAACTCCACCTCATATCTTCCATAGGGAGAGAGCGGGAGATAGTTACGCTTGCCGTTAAGCGGGAAAATCCGCCCGTTGATTTTGGCGCTGATCTGACCGTCGTCCTCCAGCCCGGTGTTGAATATCCCCCCAGCGTTGCCATCAGTCCGCCCGCTGGCAGCAATGTTTTTACCCTGTCAGCCGACGCTGCCATTGGCGGTCAAGTTGGGATTGGCGTAGCCGTCCGCCGCGCTATTTACGTTcc > 1:73555/1‑250 (MQ=255) tCCATAGGGAGAGAGCGGGAGATAGTTACGCTTGCCGTTAAGCGGGAAAATCCGCCCGTTGATTTTGGCGCTGATCTGACCGTCGTCCTCCAGCCCGGTGTTGAATATCACCCCAGCGTTGCCATCAGTCCGCCCGCTGGCAGCAATGTTTTTACCCTGTCAGCCGACGCTGCCATTGGCGGTCAAGTTGGTATTGACGTAGCCGTCCGCCGCGCTATTGACGTTCAGCGTTCCGCTGGCGTAACGAGCg < 1:144058/250‑1 (MQ=255) tCCATAGGGAGAGAGCGGGAGATAGTGACGCTTGCCGTTAAGCGGGAAAATCCGCCCGTTGATTTTGGCGCTGATCTGACCGTCGTCCTCCAGCCCGGTGTTGAATATCACCCCAGCGTTGCCATCAGTCCGCCCGCTGGCAGCAATGTTTTTGCCCTGTCAGCCGACGCTGCCATTGGCGGTCAAGTTGGTATTGACGTAGCCGTCCGCCGCGCTATTGACGTTCAGCGTTCCGCTGGCGTAACGAGc < 1:123353/249‑1 (MQ=255) tGGCGCTTATCTGACCGTCTTCCGCCAGCCCGGTTTTGAATACCACCCCAGCGTTGCCATCAGTCCGCCCTCTGGCAGCAATGTTTCGACCCTGTCAGCCGACGCTGCCACTGGCGGTCAAGTGGGTATTCACGTAGCCGCCCGCCGCGCTATTGACGTTCAGCGTTCCGCTGGCGTAAc < 1:97052/180‑1 (MQ=255) gtcgtcCTCCAGCCCGGTGTTGATTAGCACCCCAGCGTTGCCATCAGTCCGCCCTCTGGCAGCAATGTTTTTACCCTGTCAGCCGan < 1:18189/87‑2 (MQ=255) tatCACCCCAGCGTTGCCATCAGTCCGCCCGCTGGCAGCAATGTTTTTACCCTGTCAGCCGACGCTGCCATTGGCGGACAAGTTGGGATTGACGTAGGCGTCCGCCGCGCTATTGACGTTCAGCGTTCCGCTGGCGTAACGAGCGGCGAATTGTGCATACGCCCCGGCGCTGAGGGGTTTGTCATCACCGGTATAGCCGGAGAAGGCACGTGACAGATTGGCCCCAACAGGGCGAATGGTTCCTtcatca > 1:68292/1‑250 (MQ=255) aGTCCGCCCGCTGGCAGCAATGTTTTTACCCTGTCAGCCGACGCTGCCATTGGCGGTCAAGTTGGTATTGACGTAGCCGTCCGCCGCGCTATTGAcn < 1:42083/97‑2 (MQ=255) cggCAGCAATGTTTTTACCCTGTCAGCCGACGCTGCCATTTGCGGTCAGGTTGGTATTGACGTAGCCGTCCGCCGCGCTATGGACGTTCAGCGTTCCGCTGTCGGAACGAGCGTCGAATTGCGCATACGCCCCGCCGCTGAGGGTTTTGTCATCACCgn < 1:33792/158‑2 (MQ=255) | GTAACTGTCGAGTGAGTTTTTGCTGTTCTGTAACTCCACCTCATATCTTCCATAGGGAGAGAGCGGGAGATAGTTACGCTTGCCGTTAAGCGGGAAAATCCGCCCGTTGATTTTGGCGCTGATCTGACCGTCGTCCTCCAGCCCGGTGTTGAATATCACCCCAGCGTTGCCATCAGTCCGCCCGCTGGCAGCAATGTTTTTACCCTGCCAGCCGACGCTGCCATTGGCGGTCAAGTTGGTATTGACGTAGCCGTCCGCCGCGCTATTGACGTTCAGCGTTCCGCTGGCGTAACGAGCGTCGAATTGTGCATACGCCCCGCCGCTGAGGGTTTTGTCATCACCGGTATCGCCGGAGATGGCACGTGACAGATTGGCACCAACAGTGCGAATGGTTCCTTCATCA > NC_000913/307173‑307575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |