Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,837,511	C→T	L187L (CTG→TTG)	setC →	putative arabinose exporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,837,511	0	C	T	100.0%	24.7 / NA	10	L187L (CTG→TTG)	setC	putative arabinose exporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (6/4);  total (6/4)

CTCTCAACGGGCGTACTTCTGAGTAGTTTTGCTTCCACCGCAAACCCGCAAATGTTCGCCCTCGCCCGTGAACACGCCGACAGAACAGGCCGTGAGACGGTCATGTTCAGTACATTTTTACGTGCTCAGATCTCGCTTGCCTGGGTTATCGGGCCACCGCTCGCTTATGAACTGGCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGACTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTACCCAACCCGTAGAAATTTTACCCTCCACCCACAGGAAGCGGGATACGCGGCTACTTTTTGTGGTCTGTTCAATGATGTGGGCGGCGAATAATCTCTACATGATAAATATGCCGCTATTTATTATTGATGAACTGC  >  NC_000913/3837274‑3837697                                                                                                                                                                                                                                              |                                                                                                                                                                                           ntctcAACGGGCGTACTTCTGAGTAGTTTTGCTTCCACCGCAACCCCGCAAATGTTCGCCCTCGCCCGTGAACACGCCGACAGAACAGGCCGTGAGACGGTCATGTTCAGTACATTTTTACGTGCTCAGATCTCGCTTGCCTGGGTTATCGGGCCACCGCTCGCTTATGAACTGGCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGATTGATAGTCTGgtt                                                                                                                                                                               >  1:16548/2‑251 (MQ=255)                                        gcaacccctcaatttgtcgccctagcccTTGAACACGCCGACAGAACAGGCCGTGAGACGGTCATGGTCAGTTCATTTTTACGTGCTCAGATCTCGCGTGCCTGGGTTATCGGGCCACCGCTCGCTTATGAACTGGTAATGTGATGTTGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGATTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTAc                                                                                                                                        <  1:124042/235‑1 (MQ=255)                                                                         cacGCCGACAGAACAGGCCGTGAGACGGTCATGTTCAGTACATTTTTACGTGCTCAGATCTCGCTTGCCTGGGTTATCGGGCCACCGCTCGCTTATGAACTGGCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGATTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTACCCAACCCGTAGAAATTTTACCCTccacccac                                                                                                         >  1:46269/1‑249 (MQ=255)                                                                                                                               naGATCTCGCTTGCCTGGGTTATCGGGCCACCGCTCGCTTATGAACTGGCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGATTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTACCCAACCCGTAGAAATTTTACCCTCCACCCACAGGAAGCGGGATACGCGGCTACTTTTTGTGGTCTGTTCAATGATGTGGGCGGCGa                                                  >  1:17275/2‑250 (MQ=255)                                                                                                                                            ccTGGGTTATCGGGCCACCGCTCGCTTATGAACTGGCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGATTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTAc                                                                                                                                        <  1:67456/151‑1 (MQ=255)                                                                                                                                                 gatATNNGGNNNCCNNTCGCTTATGAACTGGCAATGGGANTTAGTTTTAAAGTGATGTATCTCACCGCTNCNANCGCANNTGTNGTTTGCGGATNGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTNANCCAACCCGTCGAAATTTTACCCTCCCCCCCCNGGAAGCGGATTACGCGGCTCCTTTNTGTGNNCTNt                                                                     >  2:124629/3‑213 (MQ=255)                                                                                                                                                 gTTATCGGGCCACCGCTCGCTTATGAACTGGCAATTGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGATTGATATTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTACCCAACCCGTATAAATTTTACCCTCCACCCACAGGAAGCGGGATACGCGGCTACTTTTTGTGGTCTGTTCAatg                                                               <  1:124629/219‑1 (MQ=255)                                                                                                                                                                    ctTATGAACTGGCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGATTGATAGTCTGGTTGTTTTTGCCATCAATCCAAAGAAATATTCCTGTCGTTACCACACCNGTANNNNnttnn                                                                                                                     >  2:100855/1‑144 (MQ=255)                                                                                                                                                                              ggCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGATTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTACCCAACCCGTAGAAATTTTACCCTCCACCCACAGGAAGCGGGATACGCGGCTACTTTTTGTGGTCTGTTCAATGATGTGGGCGGCGAATAATCTCTACATGATAAATATGCCGCTATTTATTATTGATGAACTgn  <  1:100855/251‑2 (MQ=255)                                                                                                                                                                                                                   gCTGCCATCGCATTTGTTGTTTGCGGATTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTACCCAACCCGTAGAAATTTTACCCTCCACCCACAGGAAGCGGGATACGCGGCTACntttnnnnngc                                                                        >  2:105466/1‑137 (MQ=255)                                                                                                                                                                                                                                              |                                                                                                                                                                                           CTCTCAACGGGCGTACTTCTGAGTAGTTTTGCTTCCACCGCAAACCCGCAAATGTTCGCCCTCGCCCGTGAACACGCCGACAGAACAGGCCGTGAGACGGTCATGTTCAGTACATTTTTACGTGCTCAGATCTCGCTTGCCTGGGTTATCGGGCCACCGCTCGCTTATGAACTGGCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGACTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTACCCAACCCGTAGAAATTTTACCCTCCACCCACAGGAAGCGGGATACGCGGCTACTTTTTGTGGTCTGTTCAATGATGTGGGCGGCGAATAATCTCTACATGATAAATATGCCGCTATTTATTATTGATGAACTGC  >  NC_000913/3837274‑3837697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑