| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,253,230 | C→T | A306T (GCG→ACG) | nupX ← | putative nucleoside transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,253,230 | 0 | C | T | 100.0% | 15.0 / NA | 8 | A306T (GCG→ACG) | nupX | putative nucleoside transporter |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (5/3); total (5/3) | |||||||||||
CCGGCGCACGGTGTGGCGCAACCGCAGAAAACGCCCCCACCACCACCCCGATAGAACCAAAGTTAGCGAAACCGCACAACGCGAAGGAAATAATCGCCACAGTTTTAGCATCGAGAGTGCCAGCCGTTTGCAGATAGGGTGAGAAATTGAGATAAGCGACAAATTCATTTATTGCCAGTTTCTGTCCAATCAAACTCCCGGCAAGATTCGCATCACTCCAGTCCACACCCATCACCCACGCCAGTGGAGCCAGCAGGTAACCTAAAATGGACTCCAGCGAGGCATGTTCAAAACCAAACCAGCCACCAACGCCGCCGATAATACCGTTAATCAACGCAATTATTGCAACAAATGCCATCACCACTGTTGCCACACCTGCGGCGATTTTCAGCCCGGTCATTGCCCCTGTCGCAGCGGCTTCAATAATGCTTTTTGGCGGTGTTTCGGTGAAAGAGAGGTT > NC_000913/2252990‑2253449 | ccGGCGCACGGTGTGGCGCAACCGCAGAAAACGCCCCCACCACCACCCCGATAGAACCAAAGTTAGCGAAACCGCACAACGCGAAGGAAATAATCGCCACAGTTTTAGCCTCGAGCGTGCCAGCCGTTTGCAGATAGGGTGCGAAATTGCGATAAGCGACAAATTCATTTATTGCCCGTTTCTGTTCAATCAACCTTCCGGCACGATTCGCATCACTCCAGTCCCCACCCATCACCCACGTCAGTGGAGcc > 1:87047/1‑251 (MQ=255) cGCCCCCACCACCGCCCCGATAGAACCAAAGTGAGCGAAACCGCACAACTCGAAGGAAATAATCGCCCCAGTTTTAGCATCGAGAGTGCCATCCGTTTGCAGATAGGGTGAGAAATTGAGATAAGCGACAAATTCATGTAGTGCCAGTTTCTGTTCAATCTAACTTCCGGCAATATTCGCATCACTCCAGTCCACACCCACCACCCACGTCAGTGGAGCCAGCAGGTAACCTAAAATGGACTCCAGCGAgg < 1:122916/251‑1 (MQ=255) gAAATAATCGCCACAGTTTTAGCATCGAGAGTGCCAGCCGTTTGCAGATAGGGTGAGAAATTGAGATAAGCGACAAATTCATTTATTGCCAGTTTCTGTTCAATCAAACTTCCGGCAAGATTCGCATCACTCCAGTCCACACCCATCACCCACGTCAGTGGAGCCAGCAGGTAACCTAAAATGGACTCCAGCGAGGCATGTTCAAAACCAAACCAGCCACCAACGCCGCCGATAATACCGTTAATCAACGc > 1:147632/1‑251 (MQ=255) gNCACAGTTTTAGCATCGAGAGTGCCAGCCGTTTGCAGATAGGGTGAGAAATTGAGATAAGCGACAAATTCATTTATTGCCAGTTTCTGTTCAATCAAACTTCCGGCAAGATTCGCATCACTCCAGTCCACACCCATCACCCACGTCAGTGGAGCCAGCAGGTAACCTAAAATGGACTCCAGCGAGGCATGTTCAaaac > 1:131698/1‑199 (MQ=255) acaGTTTTAGCATCGAGAGTGCCAGCCGTTTGCAGATAGGGTGAGAAATTGAGATAAGCGACAAATTCATTTATTGCCAGTTTCTGTTCAATCAAACTTCCGGCAAGATTCGCATCACTCCAGTCCACACCCATCCCCCACGTCAGTGGAGCCAGCAGGTAACCTAAAATGGACTCCAGCGAGGCATGTTCAAAACCAAACCAGCCACCAACGCCGCCGATAATACCGTTAATCAACGCAATTATTGcaac < 1:84184/251‑1 (MQ=255) ncAATCAAACTTCCGGCAAGATTCGCATCACTCCAGTACACCCCCATCACCCACGTCGGTGGAGCCAGCAGGTAACGTAAAATAGACTCCAGCGAGGCATGTTCCAAACCAAACCAGCCACCAACGCCGCAGATAATACCGTTAATCAACGCAATTATTGCAACAAATGCCATCACAACTGTTGACACACCTGCGGCGATTTTCAGCCCGGTCCTTTACCCTGTCGCAGCGGCTTCAATAATGCTTTTTgg > 1:14066/2‑251 (MQ=255) gATTCGCATCACTCCAGTCCACTCCCATCACCCACGTCAGTGGAGCCAGCAGGTAACCTAAAATGGACTCCAGCGAGGCATTTTCAAAACCAAACCAGCCACCAACGCCGCCGATAAGACCTTTAATCAACGCAATTATTGCAACAAATGCCATCGCCACTGTTGCCACACCTGCTGCGATTTGCAGCCCGGTCATTGCCCCTGTCGCAGCGGCt < 1:111506/215‑1 (MQ=255) gCATCACTCCAGTCCACACCCATCACCCACGTCAGTGGAGCCAGCAGGTAACCTAAAATGGACTCCAGCGAGGCATGTTCAACACCAAACCAGCCACCAACGCCGCCGATAATACCGTTAATCAACGCAATTATTGCAACACATGCCATCACCACTGTTGCCACACCTGCGGCGATTTTCAGCCCGGTCATTGCCCCTGTCGCAGCGGCTTCAATAATGCTTTTTGGCGGTGTTTCGGTGAACGAGAGGtt > 1:123692/1‑251 (MQ=255) | CCGGCGCACGGTGTGGCGCAACCGCAGAAAACGCCCCCACCACCACCCCGATAGAACCAAAGTTAGCGAAACCGCACAACGCGAAGGAAATAATCGCCACAGTTTTAGCATCGAGAGTGCCAGCCGTTTGCAGATAGGGTGAGAAATTGAGATAAGCGACAAATTCATTTATTGCCAGTTTCTGTCCAATCAAACTCCCGGCAAGATTCGCATCACTCCAGTCCACACCCATCACCCACGCCAGTGGAGCCAGCAGGTAACCTAAAATGGACTCCAGCGAGGCATGTTCAAAACCAAACCAGCCACCAACGCCGCCGATAATACCGTTAATCAACGCAATTATTGCAACAAATGCCATCACCACTGTTGCCACACCTGCGGCGATTTTCAGCCCGGTCATTGCCCCTGTCGCAGCGGCTTCAATAATGCTTTTTGGCGGTGTTTCGGTGAAAGAGAGGTT > NC_000913/2252990‑2253449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |