| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,956,470 | C→T | A180T (GCA→ACA) | torZ ← | trimethylamine N‑oxide reductase 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,956,470 | 0 | C | T | 100.0% | 10.7 / NA | 6 | A180T (GCA→ACA) | torZ | trimethylamine N‑oxide reductase 2 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (2/4); total (2/4) | |||||||||||
ATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATG‑CGGCATGATCACCTGTGCTGCCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTA > NC_000913/1956297‑1956676 | aTGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATG‑CGGCATGATCACCTGTGTTGCCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTgcg < 1:132898/251‑1 (MQ=255) gAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGATGTTCATACACCTCTACAGAACCGACCACATG‑CGGCATGATCACCTGTGTTGCCCCGGTTGAATAATcgccn < 1:103578/193‑2 (MQ=255) ggTACTGCTCCAGGCAATGTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCGGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACTCCTCTACAGAACCGACCACATG‑CGGCATGATCACCTGTGTTGCCCCGGTTGAATAATc < 1:26948/165‑1 (MQ=255) cTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTACATACACCTCTACAGAACCGACCACATG‑CGGCATGATCACCTGTGTTGCCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAacac > 1:90509/1‑233 (MQ=255) aTACACCGCGACAGAACCGACC‑CAAGTGGGCAGGATCACCTGTGTTGCCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGGCCGCCAGGTTCATATAACGTGGCAGTAAGGTTTGCGCTTTAGGCAACACGCCAGAAGAGCGCCAGCCGTAATAGCCGGCAAAAAGGGCCGATGGTCCGTTAGCTTGACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTa < 1:95841/251‑1 (MQ=255) ncATGATCACCTGTGTTGCCCCGGTTGAATAATCGCCGCTATGCCCGGAATACCCGCTCGCCAGGTTCata > 1:16148/2‑71 (MQ=255) | ATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATG‑CGGCATGATCACCTGTGCTGCCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTA > NC_000913/1956297‑1956676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |