| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,715,687 | G→A | A68V (GCC→GTC) | pdxY ← | pyridoxal kinase 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,715,687 | 0 | G | A | 100.0% | 38.7 / NA | 15 | A68V (GCC→GTC) | pdxY | pyridoxal kinase 2 |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (6/9); total (6/9) | |||||||||||
CAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATAAACAACGTGAGACTGGATAGCGAGAATATTTTTCATCATGTTCCCTGTATAAAAACCAGGGGGAGTGATTTCTCACTCCC > NC_000913/1715445‑1715930 | cAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGACAATGc < 1:127848/249‑1 (MQ=255) ggCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCTCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGACAATGCCTTGCACAATTTc < 1:23016/251‑1 (MQ=255) aaTGATATCGCTGGCAGGCAAACCGTGCCGCGCATGAAACTCTTCGACTCCCGTGGCAACGATGCAGCCTTTTTCCGGATGACCCATTTCCGGATCGCAAAAATATTTCGCCGGCGTATTCGCGGCTTGCACCGGACGGACGATACCTAGGATATGTTCGCCCGGCTCTGCCTATCCCAGATAGCCACTTATTGCGGTATGACAGGTGTGTAATTTATCAATGGCGACAATGCCTTGCACAATTTCGGTTa < 1:69231/251‑1 (MQ=255) ggcaggcaACCCGTGCCCCAAATGAAACGCTGCGTCCCCCGGTGCAACGATCCGGCCTTTTTCCGGATTACCCATTACCGGATCGCAAAAAGATTTCGCCAGCGGATTCGCGGCTGTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAAGTGTGTAATTTATCAATGTCGACAATGCCTTGCACAATTTCGGTTAAATGGCTggg < 1:165523/249‑1 (MQ=255) ccGTGCCGCACATTAAACTCTGCGACACCCTGTGCAACGTTACAGCCTTTTACCGAATTAACCATTACTGGATCGCAAAAATATTTCGCCTTCCGAGTCGCGTTTTTCACCTGACTGACGAAACCTAGGATATGTTCACCCTGCTCCGCCGATCCCAGATATCCACTTAATACTGCATCACAGTTGTTTAATTTATCAAGGTCGACAATGCCTTTCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCa < 1:109112/251‑1 (MQ=255) cGTGCCGCACATGAAACTCTGCGCCACCCGGTGCAACGATACAGCCTTTTTCCGGATGCCCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGATTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCGATACCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGACAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAg < 1:6859/251‑1 (MQ=255) cTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGACAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGgtg > 1:2785/1‑251 (MQ=255) ggATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCGATCCCAGATAGCCACTAAATACGGCATCACAGGTGTGTAATTTATCAATGGCGACAATGCCGTGCACAATTTCGGTTAAATGGCTGGGCGGCAGCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTcg < 1:171289/247‑1 (MQ=255) gCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCGATCCCCGATCGCCACTTAATACGGCATCACAGGTGTGTAATTTATCACTCGCGACCATGCCTTGCACCATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCCGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGaa > 1:96498/1‑250 (MQ=255) tGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGCGAGTAATTTATCACTGGCGACAATGCCTTGCATAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATg > 1:147854/1‑251 (MQ=255) cAGATAGCCACTTAATACGGCATCACAGGCGTGTAATTTCTCAATGGCGACAATGCCTTGCACAATTTCGGt > 1:135110/1‑72 (MQ=255) nccACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGAGACAATGACTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCCGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGACCGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATAAACAACGTGAGACTGGATAGCGAGAATATTTTTCATCATGTTcc > 1:32904/2‑251 (MQ=255) aCTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGACAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCATATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATAAACAACGTGAGACTGGATAGCGAGAATATTTTTCATCATGTTCCCTg < 1:170235/251‑1 (MQ=255) ggTGTGTAATTTATCAATGGCGACAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATAAACAACGTGAGACTGGATAGCGAGAATATTTTTCATCATGTTCCCTGTATAAAAACCAGGGGGAg < 1:38743/251‑1 (MQ=255) aaTGGCGACAATGACTTGCACAATTTCGGTTAAATGGCTGCGCGGCATCACGAAGCCAGACCATTTGCCGTATTGGGCGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCCGGCGGCGCATCGGAAACTCTGCCGCACTGTTCCCCGCATGACCATAAACAACGTGAGACTGGATAGCGAGAATATTTTTCATCATGTTCCCTGTATAAAAACCAGGGGGAGTGATTTCTCACTccc > 1:89246/1‑251 (MQ=255) | CAACCAGATTTGGCGCAATGATATCGCTGGCAGGCAAACCGTGCCGCACATGAAACTCTGCGACACCCGGTGCAACGATACAGCCTTTTTCCGGATGACCCATTACCGGATCGCAAAAATATTTCGCCTGCGGATTCGCGGCTTTCACCTGACGGACGATACCGAGGATATGTTCACCCTGCTCCGCCGATCCCAGATAGCCACTTAATACGGCATCACAGGTGTGTAATTTATCAATGGCGGCAATGCCTTGCACAATTTCGGTTAAATGGCTGGGCGGCATCACGCAGCCAGTCCATTTGCCGTATTGGGTGTGATTAGAAAATTGAACGGTGTTCAGCGGCCAGACGTTCGCGCCCAGGCGGCGCATCGGAAACTCTGCCGCACTGTTACCCGCATGACCATAAACAACGTGAGACTGGATAGCGAGAATATTTTTCATCATGTTCCCTGTATAAAAACCAGGGGGAGTGATTTCTCACTCCC > NC_000913/1715445‑1715930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |