Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3458892	3458935	44	2 [0]	[1] 2	gspE	Type II secretion system protein GspE

GAAGATTCAGCGGCACCGGTTATCCGCTTGATCAATGCGATTTTGAGTGAGGCCATCAAAGAAACCGCCTCTGATATCCACATTGAAACCTATGAAAAAACAATGTCGATCCGTTTTCGCATCGACGGCGTTTTGCGGACAATTTTACAGCCAAACAAAAAACTGGCGGCACTGCTTATCTCCCGAATTAAGGTCATGGCTCGTCTTGATATCGCCGAAAAACGTATTCCACAGGATGGAAGAATTAGTT  >  NC_000913/3458642‑3458891                                                                                                                                                                                                                                                          | gaaGATTCAGCGCCCCTGTTTATCCGCTTGATCAAGGCGATTTTGAGTGGGGCCATCAAAAAAACCGCCTCTGATATCCACATTGAAACCTATGAAAAAACAATGTCGATCCGTTTTCTCATCGACGGCGTTTTGCGGACAATTTTACAGCCAAACAAAAAACTGTCGGCACTTCTTATCTCCCGAATTAAGGTCATGTCGCGTCTTGATATCGCCGAAAAACGTATTCCACAGGATGGAAGAATTAGtt  <  1:98031/250‑1 (MQ=255)                                                                           tatCCACATTGAAACCTATGAAAAAACAATGTCGATCCGTTTTCGCATCGACAGCGTTTTGCGGACAATTTTACAGCCAAACAAAAAACTGGCGGCACTGCTTATCTCCCGAATTAAGGTCATGGCTCGTCTTGATATCGCCGAAAAACGTATTCCACAGGATGGAAGAATTAGtt  <  1:44973/176‑1 (MQ=255)                                                                                                                                                                                                                                                          | GAAGATTCAGCGGCACCGGTTATCCGCTTGATCAATGCGATTTTGAGTGAGGCCATCAAAGAAACCGCCTCTGATATCCACATTGAAACCTATGAAAAAACAATGTCGATCCGTTTTCGCATCGACGGCGTTTTGCGGACAATTTTACAGCCAAACAAAAAACTGGCGGCACTGCTTATCTCCCGAATTAAGGTCATGGCTCGTCTTGATATCGCCGAAAAACGTATTCCACAGGATGGAAGAATTAGTT  >  NC_000913/3458642‑3458891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑